Salmo trutta (river trout): 115168167
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Entry
115168167 CDS
T08542
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
stru04261
Adrenergic signaling in cardiomyocytes
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115168167
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115168167
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115168167
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115168167
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115168167
03036 Chromosome and associated proteins [BR:
stru03036
]
115168167
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115168167
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115168167
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115168167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115168167
NCBI-ProteinID:
XP_029579043
Ensembl:
ENSSTUG00000000598
UniProt:
A0A673VLR1
LinkDB
All DBs
Position
3:10900688..10971377
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPTTILSSTCHTEADIISTVEFNPSGELLATGDKGGRVVVFQREQET
KSEPQRRGEYNVYSTFQSHDPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKL
WKISERDRRPEGYNLKDEDGRIRDPSTITSLRVPVLQNTDLMVEATARRVFSNAHTYHIN
SISVNSDLQTYISTDDLRVNLWNLEITDQSFNIVDIKPCSMEDLTEVITAAEFHPQQCNT
LAYSSSRGSVRLCDMRKQALCDTHCKFFEEPEDPSTRSFFSEIISSISDIKFSHSGRFLM
TRDYLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILH
SAWHPQENIIAVAASNNLYIFQDKVT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctcccaccaccatcctgtct
tccacatgccacaccgaagctgacatcatctccacggtggagtttaacccttcgggggag
ctgctggccacaggggacaaaggaggaagagtggtggtcttccagagagagcaggagact
aaaagcgagccccagaggcgaggggagtataatgtgtacagtacgttccagagtcatgat
ccagagtttgactacctgaagagtctggagatcgaggagaagatcaacaagatcagatgg
ctgccgcagcagaacgctgcctacttcctcctctccaccaacgacaagacagtgaagctc
tggaagatcagtgagagagacagacgaccagagggatacaacctgaaggatgaagatgga
cgaatcagagacccatctacaatcacctcactacgggttcctgtcctccagaacacagat
ctgatggtggaggcgacagcgcggcgtgtgttcagtaacgcccacacctaccacatcaac
tccatctctgtgaactctgacctccagacctacatctccaccgacgacctcagggtcaac
ctgtggaacctggagatcaccgaccagagcttcaacatcgtggacattaagccgtgtagc
atggaagatctgacggaggtgatcacagcagcggagttccatcctcagcagtgcaacacc
ttggcttacagcagcagtagagggtcagtacgactctgtgacatgaggaaacaggcgctc
tgcgacacacactgcaagttctttgaggagccagaggacccctccactcgttcatttttc
tcagagatcatctcttccatctcagacatcaagtttagtcacagcgggcgcttcttgatg
acacgggactacctgacggtcaaggtgtgggacctcaacatggagaccagaccggtccag
acataccaggtccatgactacctgaggggtaagctgtgttctctgtacgagaacgactgc
atcttcgacaagtttgagtgtgtctggaatgggtcagacagtgtcataatgacggggtca
tataataatttcttccggatgtttgatcggaacaccaagaaagatgtgaccctggaggct
tccagagagaacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgtgggaggg
aagcgtcgtaaagacgaggtgactgttgacagtctggacttcagtaagaagatcctccac
tccgcctggcacccacaggaaaacatcatcgctgtggcagccagtaacaacctctacatc
ttccaggacaaggtcacctag
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