Salmo trutta (river trout): 115168186
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Entry
115168186 CDS
T08542
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11 isoform X1
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115168186 (lsm11)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115168186 (lsm11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115168186
NCBI-ProteinID:
XP_029579085
Ensembl:
ENSSTUG00000001012
LinkDB
All DBs
Position
3:11053808..11055894
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AA seq
378 aa
AA seq
DB search
MSAFVLKMEERERRGDEQQKCPESEKKERESTSASDATEHTAEEEDDIAAKLDVTSEKFD
PLLALYSTTVPLPYPNVKCFNNIAEYESFLKGGRGRAKPENVEKKLRKARKGVADPERIE
KLKRLMVNNPIEREDGEEGTSGTARRGRIQKAAKNVLTRMPLHTGSPLGELHRCVQERIR
VKVHIRTFKGLRGVCSGFIVAFDKFWNMAMVDVDETYREPLLGEAFYHEKALTVTRLFDK
LKLQESAALRECEEKKKQMGKRKAEPFHPPPDTQTRDGRRGDPNRGDPRRRGDPRAVDPR
LARATVGPPVGDDPGALGATGKTQGSNVKGQESGTEGPKRRGSQKKEVSQPYGRVHTRHV
NQLFIRGENVLLVNLQPL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgttttaaaaatggaggagagggaaagaagaggagacgaacaacaaaaa
tgtccagaatcagaaaagaaagagagagaatcaacaagtgcttcagatgcaaccgaacat
acggcagaagaagaagatgatatcgcggcaaagttggacgtcacctccgagaaatttgac
cccctcctggcgctatactcgactacagtgcctcttccatacccaaacgtgaaatgcttc
aacaacatagccgagtatgaaagctttctaaaggggggtcggggccgcgccaagccggag
aacgtggagaaaaagctgaggaaagccaggaaaggtgtagcggatccggagaggatagag
aaactcaagaggttgatggtgaacaacccgatagagagagaagatggagaggaggggacc
agcggcactgcccgccgtggtagaatacagaaggctgccaagaatgtcctgaccaggatg
cctctccatacaggaagtcctctgggggagctgcaccgctgcgtgcaggagaggatcagg
gtgaaagttcacatcagaaccttcaaggggctccgtggagtgtgttctggcttcatagtg
gccttcgacaagttctggaacatggcgatggtagatgtagatgagacctacagggaacct
ctgctgggtgaagctttctaccacgagaaggccctcactgtcacacggctctttgacaag
ctgaaactccaggagagtgcggcactgagagaatgtgaggagaagaagaagcagatgggc
aagaggaaagctgaacccttccatcccccgcctgacacccaaaccagagacggcagacga
ggtgaccccaatagaggggaccccagaaggagaggagaccctagggcagtggacccccga
cttgcaagggctacagttgggcccccagtgggcgatgaccccggagccctaggggccaca
ggtaagacccaggggtcaaatgttaaaggtcaggagtcagggactgagggtcccaagaga
agagggtcccagaagaaagaagtgtcccagccctacgggagggttcacacgcgccacgtc
aaccagctcttcatacggggagagaacgtgcttctagtcaacctacaacctctctga
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