Salmo trutta (river trout): 115168325
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Entry
115168325 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115168325
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115168325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115168325
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115168325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
115168325
NCBI-ProteinID:
XP_029579339
Ensembl:
ENSSTUG00000046966
LinkDB
All DBs
Position
30:complement(24441225..24447220)
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AA seq
334 aa
AA seq
DB search
MPRIYVGKLNYNAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYGGGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIR
LVEEKSRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSHSRSHSRSKRRHSKSGRKS
RSRSRTRKSRSRSNKSKSRSKSCSKVKSERDSRSRSKEKSAKKKSRSRSASPVENGKEER
SSRSPSPAADCRSKSPDKRSVSRSKSRSRSASRD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatctatgttggaaaacttaattataatgctcgagaaaaagaccttcaaaga
tttttcaatggctacggaaagcttatggaaattgatctgaaaaatggatatggctttgta
gaatttgaggataatcgcgatgcggacgacgcagtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgccagaggaccgcgccgtgaccgagatggatat
ggtggtggcgggggtgggggtcgcagtagtagtggttacagcagcagcagaagccgcact
ggcagggataagtacgggccacccgtccgtaccgagtaccgactgatcgttgagaatctg
tccagccgctgcagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacg
tatgccgacgcccacaaggagcgtaccaacgagggtgtcatcgagtttggctcacgctcg
gacatgaggagggccctagacaagctggacggcacggacatcaacgggaggaagatccgc
ctggtggaggaaaagtctcgccgccgacgctcctactctggcagtcgctccaggtctcgc
agcagacgtcgctctcgtagcaggagccgcaggagcagtcgctccaggagtaactccaga
tcccactcccgatcccattctcgcagcaagcgacgccactccaagtctggaaggaagtct
cgttcccgctctcgcacccgcaaatccagatctcgttccaacaaaagcaagtcccgttcc
aagagctgctccaaggtgaaatccgagcgggattcccgcagccgctccaaggagaagtcg
gccaaaaagaagtcccgtagccgctcggcgtctcccgtggaaaatgggaaggaggagcgt
tcctctcgctccccttccccagcagctgactgtcgctccaagtctccggacaagcgctca
gtctcccgctccaaatccaggtctagatcagcttcccgagattaa
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