Salmo trutta (river trout): 115168444
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Entry
115168444 CDS
T08542
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115168444 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115168444 (ogg1)
Enzymes [BR:
stru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
115168444 (ogg1)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115168444 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
115168444
NCBI-ProteinID:
XP_029579588
Ensembl:
ENSSTUG00000009971
UniProt:
A0A673XPB8
LinkDB
All DBs
Position
30:complement(28915050..28925409)
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AA seq
401 aa
AA seq
DB search
MSQHALLSAGTKSWHSLACSRSELRLDLTLGCGQSFRWRETGDGHWTGVMGGRVWTLTQT
DDTLWYHTYNSPNAIGGDGRKRRAGSLLQGSGKRSKGVIEVKEEEEGEPVAVTPDPDRKE
EELLNDYFQLKVKLGDLYRDWGAADPHFNSIAKIFTGVRMLRQDPTECLFSFICTSNNHI
SRIQGMVERLCQSLGTPLCQLDQTSYHDFPSLHALADNSVEARLRDLGFGYRARFLQQSA
RQILDSHGGPHWLQGLRSVPYLQARDALRTLPGVGPKVADCVCLMSLEKACVVPVDTHVW
QIAKRDYSCAAGNGQKSLTDKVHRQIGDFFRQLWGPYAGWAHSVLFCSDLKKFQKLKETH
CLKQEEEKKKVKIKVEGEGMNKKIKKMCNRKVKMCVKEEVG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgcattgctgtcggcggggaccaagtcatggcactccctggcctgttca
cgatcagagctccgtttggacctcacactaggctgcggacagagcttccgctggcgagag
acaggggatggccactggaccggagtgatggggggacgagtgtggactctcacccagaca
gacgacacactatggtaccacacatacaatagccccaacgccataggaggggatgggagg
aagcggagggcaggttccctgctccaggggtcagggaaaagatccaagggagtgatagag
gtgaaggaggaagaagagggggagccagtggctgtgacccctgacccagacagaaaggag
gaagagctgctgaatgattatttccagctgaaggtgaagctgggggatctgtacagagat
tggggagcagccgacccacactttaacagcattgccaagatcttcacaggtgtgcgtatg
ctgcgtcaggaccccacagagtgcctgttctccttcatctgcacctctaacaaccacatc
tctcgtatccagggcatggtggagaggctgtgccagtccttgggcacccctctgtgtcag
ctggaccagaccagctaccacgacttcccctccctgcatgcactcgcagacaacagtgtg
gaggctcgtctgagggacctggggtttgggtacagggccaggttcctgcagcagagtgcc
agacagatcctggactctcacggtgggccccattggctccaggggctccgcagtgtcccc
tacctgcaggcacgtgacgcactgcgcaccctccccggggtaggccccaaggtggcagac
tgtgtgtgtctgatgtctctggaaaaggcctgtgttgtgcctgtggatacacacgtgtgg
caaatcgcaaaacgagactacagttgtgcggcgggcaatgggcagaagagcctcacagac
aaggtccaccgtcaaataggggacttcttcaggcagctatggggtccgtatgctggttgg
gcacactcggtgttgttctgttctgacctgaagaagttccagaagctgaaagaaacacac
tgtctgaaacaggaggaggagaagaagaaggtcaagataaaggtggagggagagggaatg
aacaagaaaataaaaaaaatgtgtaatagaaaggtgaaaatgtgtgtgaaggaggaggtg
gggtga
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