Salmo trutta (river trout): 115168449
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Entry
115168449 CDS
T08542
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04810
Regulation of actin cytoskeleton
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115168449
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115168449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115168449
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115168449
Factors involved in mRNA localization
Other mRNA localization factors
115168449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
115168449
NCBI-ProteinID:
XP_029579611
Ensembl:
ENSSTUG00000003364
LinkDB
All DBs
Position
3:complement(13130774..13172101)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALVSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIP
VGTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaatgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccaccttcatccatcatgtaccaggct
aacttcgacacaaactttgaggacaggaatgcgtttgtgaccgggatagctcgctatatc
gagcaggctactgtccactctagcatgaatgagatgctggaggagggtcatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaacgag
cagcccaacagggtagagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctaatgaagttcatgtacttccagcgtaaggctatcgagcgtttctgcggggaggtg
aagcgtctgtgccacgctgagcggaggaaagactttgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgtttgctgtgcttgacgaactcaagaacatgaagtgcagc
gtcaagaacgaccactctgcctataaaagggcggctcagttcctgaggaagatggccgac
cctcagtccatccaggagtcacagaacctctccatgttcctagccaatcacaacaggatc
actcagtgtctgcagcagcagttggaagtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagtgagaaa
catatgctgctcaaggtgatgggtttcggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaagttcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagacc
agcgctcactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgacgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccggctcaggcctggacagtcagaaa
tcagatgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagttggtccacccgacagataag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcaatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgcaccatgctggagtcgttgatagccgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagttctggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcactgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagttgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggttactacgctctgaccaagttc
aagaaacagttcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaaactggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggataagcgtttcagggcggagtgtaaaaactatggcgtgatcatcccctaccccccc
tccaatcgttatgagaccctgctcaaacagagacacgtacagctcctaggtcgctccatc
gacctgaaccgtctgatcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagccgctttgagagtgaagacctcacctccatagtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctttcgaagcacatgaccctggacagcttcgac
gccatgttccgtgaggccaaccacaatgtgtctgctccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgtgcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcccacatctat
agctcctacaggaacttcgtaggcccgccccacttcaaaaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggaactgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaggtaatgcccaagatctgtcgcctg
ccgcgccacgagtatggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacagatgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctggtgtcccaggaggaggtgtgtgac
ctgcttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggag
cgtctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgccc
ctcattgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttg
accaaggagcgtctttgttgtggcctgtccatgttcgaggtgatccttacgaggatccgt
agtttcctacaggacgccgtgtggcgaggcccaccccccaccaacggcgtgatgcacgtg
gacgagtgtatggagttccaccgcctctggagtgccatgcagtttgtttactgcatcccc
gtcggcactcatgagttcaccgccgagcagtgttttggtgacgggctgaactgggcaggc
tgctccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctac
cacctgctcaaggtgcagaggcaggatggcaaggatgagatcatcaagaacgtgccgctg
aagaagatggctgatcggatcaggaagtaccagatcctgaacaatgagatctttgccatc
cttaacaagtacatgaaggctgtggagacggatagttccaccgtggagcatgtccgctgc
ttccagccacctatacaccagtccctggccacaacatgctga
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integrated database retrieval system
