Salmo trutta (river trout): 115168733
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Entry
115168733 CDS
T08542
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
stru04980
Cobalamin transport and metabolism
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115168733
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115168733
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115168733
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115168733
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115168733
03029 Mitochondrial biogenesis [BR:
stru03029
]
115168733
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115168733
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115168733
HMT complexes
COMPASS/SET1 complex
115168733
MLL-HCF complex
115168733
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115168733
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115168733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
115168733
NCBI-ProteinID:
XP_029580130
Ensembl:
ENSSTUG00000007278
LinkDB
All DBs
Position
30:43072366..43126614
Genome browser
AA seq
1879 aa
AA seq
DB search
MASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ
WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP
KNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWD
IPITYGVLPPPRESHTAVVYTEKSRLVIYGGMSGCRLGDLWILDIDTLTWSKPSINGTAP
LPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWESVLLD
SLEDNIPRARAGHCSVAINTRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPSRVQL
VRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAAAATSPGVSPATSLPVNSSPKSPVTAS
AVSVQGITLVPSMPGSPVPARGPAILKVSAPHSTTGTSIVTVRQANQGGKSPVMVTSLPA
GVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATIVKTVAMS
PGAQTAKVASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITVHKSGTVTVAQQHQ
VVTTVVGGVTKTITLVKSPLTLGGGGTLLTAANQGQNKVMSGKDVQHWLSNLSNLGKVMS
VVQTKPGQTGAVTGQAGSSLQHILQTKGPLPAGTILKLVTSADGTPTTIITTSKAGGTAG
GKPTILSYSSMPTSTSKPGTHIIKTIPMSTIGQTGVTGSGMKSPITIITTKMMTPGTGTP
GKIISAMPRTGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPNVTTLV
VKGTTGVTTLVTGTVSTSLAGGSVATAAPITTLGTMTTLPGQVTVSTAQAGGQATQVTLI
TTPSGVEAQPVHDLPVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPCETHETGTTNTA
TTASANMTGNGEVERMCTNPPCETHETGTTNTQTTASSNMGQVQQVCTNPPSETHDTGTT
NTQTTASCNMGSNQQQQGSCVSDNNTSGSDPPSSPCPSGAGAVSPSSVSGTSSVPGVLRP
ETLRTGTTYTSTTARSNMGSDKMGMTLSSSSSDNQSKSSSGGGGGGGCPLTSPVCSSPPC
ETHETGTTTMSTQANSSMGSGQTTGTVQKVCSNPPCETHETDTTNTPSQTTSNLAGTGTG
TGTVQRVCSNPPCETHETGTTNTPSQTTSNLAGTGTGTTNTPSQTTSNLTGTATGTVQRV
CSNPPCETHETGTTNTPSQTTSNLTGTATGTVQRVCSNPPCETHETGTTNTATTAQPGDS
TQGDNGTTEAPSSSSATTETSASTTSGRAVTTVTQSTPTPGPCVPEISSMSGSSEAVASG
AEEEEEAMQTDSLPEGTVRVVTLEEAAAAGIHVHVEGMEEQNQGEQEGLPAELMSEGGSG
GQQTLMVTGLTPEELAVTAAAEEAAQHAAAEEANAQAKAIQAVLQAAQHAVMNEGDGGHH
TTTIPIVLTQAELAALVQQQQQLQEAQAQAQALAQAQALAQAQAAAAQQNQAAAAAAAQQ
NQPTEGLAPADSLNDPASESNADELAAAVTQAVARLAPSCTLTPTQTMMATSPAKIQAAT
PMAEGVNGIESAAGRPGPSPAVAKAPLKKDNQWFDVGIVKVTNTVVTHYYLPDEDAPAVD
DDSGTIPDYSQMRKMDLQPGTAYKFRVAGINTCGRGNFSEVSAFKTCLPGFPGAPCAIKI
SKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSAQSGEQAKPTTTTTPAQLAFMRVFCGPN
PSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQEISKDGLAGKPTVKR
PGSSPDMKAAGPKKARSDQ
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggctcagttctgcagccacggtggaagcgggttttgggttggtccggtcct
gtccctcggccccgacatgggcaccgtgcggttgcaatcaaagaattgatggtcgttttc
gggggcggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaaccag
tggttcattcctgctgtccgtggtgatatcccacctggctgtgctgcgtatgggtttgtg
tgtgatggcaccaggctgctggtgttcggagggatggtggagtatggcaaatacagtaac
gatctgtatgaactgcaggccagccgctgggagtggaagcgtctgaaggccaagtctcct
aagaacggcccccctccatgtccccgtttgggccacagcttctccctggtagggaacaaa
tgttacctgttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga
taccttaatgatctgtatacgttggagctgcgtgctggctccagtgtggtgggctgggac
atccccatcacctacggggtgttgcccccacccagagagagccacactgccgtcgtctac
acagagaagtcccgtctggtcatctatggaggcatgagtggttgtcgtctgggagatctg
tggatcttagacatagacaccctcacatggagtaaaccgtctatcaacggaacagctcct
cttcctcgcagtctccactctgccacaaccatcaccaacaagatgtacgtgttcggaggc
tgggttcccctggtgatggatgacgtcaaagtagcgacacacgagaaggagtggaagtgc
accaacacactggcctgtctcaacctagactcgatggtgtgggagtcagttctgctggac
tctctagaggataacatccccagggccagggccggtcactgctccgtggccatcaacaca
cgtctctacgtgtggagtggacgggacggataccgcaaggcctggaacaaccaggtgtgc
tgtaaggacctctggtacctggagacagagaagccccgccccccgtcacgggtgcagctg
gtgagagccaataccagtagtctggaggtgagctggggggcggtaccgactgcggacacc
tacctgctgcagctgcagaagtacgatatcccccctgccgcggctgccacttcccccggc
gtcagccccgcgacctcactgccggtcaattcttcccccaagagccccgtcacagcctcg
gcagtgtccgtccagggcatcaccctggtcccttccatgcctgggagtccagtccctgct
cgcggaccagctattcttaaggtgtctgctccccattccaccacaggcacctccatcgtc
acggtgagacaggccaaccagggcggaaaatcccctgtcatggttacatcacttcctgct
ggggtccgcatggtggtgccggcccaggtcgcacagggaaccccaatgggaagcagccct
cagatgagtggcatggctgcgttggctgcagcagctgcggctacccagaagatcccgccc
tccacggccaccatgcagctgccagccggtgccactatagtcaagaccgtggccatgagc
cccggagcacagactgctaaagtagcttcgcctgttatgatcagtaacccagctactcgc
atgctgaagactgctgcggctcaggtgggcacgtcaggtgtcgccacgcccggaacgccc
aatcggccaatcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccag
gtggttaccacggtagtgggaggagtcaccaagacaatcactctggttaagagtcccctc
actctgggaggaggtggcacgctgctgactgcggccaaccagggtcaaaacaaagtgatg
tctggcaaggacgtgcagcattggctgtctaacctgtccaacctggggaaggtgatgtca
gtggtccagacgaagcctggtcagacaggagcggtgacgggacaggctgggtccagccta
cagcacatcctacagacgaagggtcctctcccggcgggtactatcttgaagctggtgaca
tcagccgacggcacgcccaccaccatcatcaccacttccaaggccgggggcaccgcgggg
ggcaagcccaccatcttgtcctacagcagcatgcccacctccacctctaagccgggcacc
cacattatcaagaccatacccatgtcgaccatcggacaaacgggagtgacaggaagtggt
atgaagtcccccattaccatcattaccactaagatgatgacaccaggcaccgggacacca
ggcaagatcatcagcgcaatgcccagaactggggctggtcagcagggactcacacaggtg
gtgctgaagggtgcccccggacagcccggaacaattttacggaccgtccccatgggaggt
gtacgtctcgtctccccggtaacggtttccggcgtcaaacctaacgtcaccaccctggtc
gtcaagggaaccacaggtgtgactacgttggtgactggcacagtgtcaaccagcctggca
ggaggaagtgttgccactgctgctcctatcaccaccttgggcaccatgacgaccctgcct
ggacaggtcaccgtctccacagcacaggcaggaggccaggccacccaagtgaccttaatc
actacccctagcggtgtagaggctcagcctgtccatgaccttcctgtctccatcttgtcc
tcccccacctccgccgacccctcctccactcagcccgaggcaggcgacccaggaaccgtg
accctggtctgctcaaacccaccctgcgagacccacgagaccggcactaccaataccgct
acaacggcctccgctaacatgactggtaatggtgaggtagagaggatgtgtacaaacccg
ccgtgtgaaactcacgagactggcaccaccaatactcaaacgacggcgtcctccaacatg
ggccaggtacagcaagtgtgcaccaacccgccgtcagagactcacgatacaggtaccacc
aacacccagactaccgccagctgtaacatgggatccaaccagcaacaacaaggctcttgc
gtaagcgacaacaacaccagcgggtctgatcccccgtcctctccgtgcccctccggagcc
ggagccgtctccccttcgtctgtgtctggtaccagctctgtgcccggggtgctacgaccg
gagactctgagaacggggaccacctacacctcgaccaccgcacgctctaacatgggttct
gacaagatgggcatgacgcttagctcctcgtcctcagataaccagagcaagtcatccagc
ggtggaggaggaggaggaggatgccccctcacctctcctgtctgctccagtccaccttgt
gaaacacacgagactggcactaccactatgtcaacgcaggcgaactccagtatgggcagc
gggcagactacagggacagtgcaaaaggtgtgttccaatccgccgtgtgaaacacacgaa
acggacaccaccaacaccccgtctcagactacgtccaacctggcggggacgggaacaggg
acagggacggtccagagagtttgttccaacccgccgtgtgaaacacacgagaccgggacg
accaacaccccgtctcagactacgtccaacctggcagggacggggacagggacgaccaac
accccgtctcagactacgtccaacctgacagggacagcgacagggacggtccagagagtt
tgttccaatccgccgtgtgaaacacacgagaccgggacgaccaacaccccgtctcagact
acgtccaacctgacagggacagcgacagggacggtccagagagtttgttccaatccgccg
tgtgaaacacatgaaacagggacgaccaacacagctaccacagctcagcctggtgactcg
acacaaggagacaatggaactacagaggctccctcgtcgtcctcggcaaccaccgagacc
agcgcatcgacgacatctggcagagccgtcaccacggttactcagtccacgcccacacct
gggccctgcgtacctgagatctcatcaatgtctgggtcgtctgaggcagtggcatcgggg
gctgaagaggaagaggaggccatgcagaccgactctctcccagagggcacggtgagggtc
gtgaccctggaggaggctgcagcagctgggatacatgtccatgtggagggcatggaagaa
cagaaccagggggagcaggagggcctgcctgcggagctgatgtctgaaggtggctcgggg
ggccagcagaccctgatggtgacgggtttaacccccgaggagctggctgttaccgctgct
gccgaggaggcagcacaacacgctgctgctgaggaggctaacgcccaggccaaggccata
caggctgtcctgcaggccgcacagcacgctgtcatgaatgaaggagacggtggccatcac
accaccaccatccccattgtgttgactcaggctgagctggcagccctggtacaacaacaa
cagcagctgcaggaggcccaggctcaggcccaggctcttgctcaggcccaggctcttgct
caggcccaggcagcagcagcacaacaaaaccaggcagcagcagcagcagcagcacaacaa
aaccagccaactgagggcctggccccagcagacagcctgaacgacccagcgtcagagagt
aacgccgatgagctggctgctgcagtgacccaggctgtggcccggttagccccgtcctgc
accttaacaccaactcagacaatgatggcgaccagcccggctaagatacaggcagctacg
cccatggcggagggggtcaatggaatagagtctgccgcagggaggccaggaccgtctcct
gcggtggccaaagccccgctgaagaaagacaaccagtggtttgacgttggcatcgtcaag
gttaccaacaccgtggttacgcactactacctacccgacgaagacgcgcctgctgtcgat
gatgactctgggacgatcccggactacagtcagatgaggaagatggatctccagccaggg
acggcctataaattcagagtggccgggatcaacacttgtggccgggggaacttctcagag
gtctcagccttcaagacctgtctaccaggcttccccggagctccatgtgcgatcaagatc
agcaagagcccagacggcgcccacctgacctgggagcctccgtcggtcacatctggtaag
atcatcgagtactcggtgtacctggccatccagagcgcccagagcggggagcaggccaag
cccactaccaccaccaccccagcccagctggctttcatgcgggtgttctgtgggcccaac
ccttcctgtctggtgcagtcgtccagcctctccaacgcacacatagactacaccaccaag
cctgccatcatctttcgtatcgcagcccgcaacgagaaaggttacggccctgccacgcag
gtcaggtggctccaagagattagtaaagatggccttgcaggtaaacctactgttaagaga
ccaggctcctcgcctgacatgaaagctgctggtccgaagaaggccagatcagaccagtga
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