Salmo trutta (river trout): 115168814
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Entry
115168814 CDS
T08542
Name
(RefSeq) iroquois-class homeodomain protein irx-1-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115168814
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115168814
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PCB_OB
MscS_TM
Motif
Other DBs
NCBI-GeneID:
115168814
NCBI-ProteinID:
XP_029580222
Ensembl:
ENSSTUG00000014788
UniProt:
A0A673YJ06
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All DBs
Position
30:complement(11387728..11389589)
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AA seq
357 aa
AA seq
DB search
MTAQGYIKSSRGCTYCHSKSDSQDVRMSASQIGFGNFFFERNINMLPGYQIPVLGCQPGV
QQQQAPHLAAMAGVPLAYSGLQGYNFIPYPHYRHIAHMNNSFDLKTVSPYYEALLGRGGP
FYPQYRPGATDDPSRVAKVATRESTSALKAWLNEHLKNPYPTKGEKIMLAIVTKMSLTQV
STWFANARRRLKKENRVSWAFKGKSDEEEGESDEEKSDGSLQTSALVDEDEIDLQTVDDK
VEDIGHRVDNSTPELVDARLEKQSSDDHRDSTRAHGENDVEKSDTERTSSPSRLGCKDNV
ECQKPKIWSLAETATSETVKKPHQSCHPRSTEMGKFWSEWASRNRLYIPRYTAHDIL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaggggtatattaaaagttcgcgagggtgcacatactgtcattcaaaatct
gatagtcaggacgtaaggatgtctgcgtcacaaattggatttggcaacttcttctttgaa
agaaacatcaacatgctccctggatatcagataccggttttgggatgtcaacccggggta
caacagcaacaagcccctcatcttgctgcgatggctggggtccctttggcatattcagga
ctacagggatacaactttatcccctatccacactacagacacattgcgcacatgaacaac
tccttcgacctgaagactgtctctccgtattatgaagcgcttctcggccgaggagggccg
ttctacccgcaataccgaccaggcgcaaccgatgaccctagcagagtcgccaaggtggct
acccgggaaagcaccagcgcgctcaaggcctggttgaacgagcatctcaagaatccatat
cctacgaagggcgagaagatcatgcttgccatcgtaaccaagatgagcctcacgcaggtg
tcaacttggtttgccaacgccaggcgacggctgaagaaggagaatagggtgagctgggcg
ttcaaggggaaatctgacgaggaggagggcgaaagcgacgaggagaagagtgatggctct
ctgcagacaagcgcgttggttgatgaagacgaaatagatcttcaaaccgtcgatgacaag
gtggaggatattggacatagagtggacaactcaacgccagagttggtggacgcacgcctg
gagaaacaatcaagcgatgaccatagagacagcacgcgtgctcacggggaaaatgatgtc
gaaaagagtgacaccgaacgcacatcatccccatctcgtctaggatgtaaggacaacgtt
gagtgtcaaaagcccaaaatatggtctttggcagaaaccgcgacctcggaaacggtgaaa
aagccccaccagtcgtgtcatcccaggagcacagaaatgggcaaattctggtcagaatgg
gcatcaaggaatagactgtatattcccagatatactgctcacgatattctttaa
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