Salmo trutta (river trout): 115168887
Help
Entry
115168887 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: aladin-like
KO
K14320
aladin
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115168887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115168887
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115168887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
eIF2A
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
115168887
NCBI-ProteinID:
XP_029580272
LinkDB
All DBs
Position
30:24817952..24821469
Genome browser
AA seq
382 aa
AA seq
DB search
MTAGVAVIRSDCAVWSFAWHPHTQKCAVSRXDDSIQIYNPKSATTPTLKHRLQRSVAALQ
RKPLCASALAVACHNCLLVWHVDPTSFSTRPSSGCAQVLSHPGHSPVTSMAWSPNGSLLV
SASPRDTAMLVWDVAVESCVPLXRVGGGGVTYLSWSPDVSRVLAATPSSLFRVWETRMWT
CERWPCLKGRCQSGSWSLDGSRLLFSVQGETVIYALTFTDTPGMPLGMSGGPKAATVVAD
LSKTTLNTPDGDMAVGGEIQSLAWDPTGERLAVLLKRDAEAGHPAMIAVFKTQINPAFKL
LPCGFVQGEAGTEPRLMQFNPSYQHGAQLTVCWSNGKITHMPFCFMSAGNPQPGLGGSPS
LPLSHGRPADYANQTLYTELIS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctggtgtggcagtaatacggtcggactgtgcagtgtggagcttcgcctggcac
ccacacacccagaagtgtgctgtttcccgttaagacgactccatccagatctacaacccc
aagagtgctactactcccaccctaaagcaccgtctgcagcgcagtgtggcagccctgcag
cggaagcctctgtgtgcgtctgccctggccgtggcctgtcacaactgcctgctggtctgg
catgtggaccccacctcgttctctaccagaccctcttctggctgtgcccaggtcctgtcc
cacccaggccactcccctgtcacttccatggcatggtcacctaacggatctctcctggtg
tcggcctctcccagggacactgccatgctggtgtgggatgtagctgttgagagctgtgtg
cctctccgtgtgggagggggaggagtcacgtacctgtcctggtcccctgatgtcagtcgc
gtgctggcagctaccccctcctccctcttcagggtttgggaaaccaggatgtggacttgc
gagcggtggccttgtctgaagggacgctgtcagtctggcagttggagtctcgatgggagt
cggctgctcttcagtgtgcaaggagagactgtcatctatgccctaactttcactgacacc
ccagggatgcccttagggatgtcaggggggccgaaggcagcaacagtggtggccgacctg
tctaagacaaccttaaatacaccagatggagatatggcggtcggaggagagatccagtcg
ctagcgtgggacccgacaggagagagactagccgtgcttctcaaaagagatgctgaagca
ggccaccctgccatgatcgcagtgttcaagactcaaatcaaccccgcttttaagcttctg
ccatgtggttttgttcagggggaggccgggacagagcccagactgatgcagttcaacccc
agttaccagcatggagcccagctcactgtgtgttggtctaatggaaagattacccatatg
cctttttgctttatgagtgctgggaatccccagcccggcctgggaggcagcccctctctc
cccctgtcccatggcaggccagcagactacgccaaccagacactctacacagaactcatc
tcctaa
DBGET
integrated database retrieval system