KEGG   Salmo trutta (river trout): 115168887
Entry
115168887         CDS       T08542                                 
Name
(RefSeq) LOW QUALITY PROTEIN: aladin-like
  KO
K14320  aladin
Organism
stru  Salmo trutta (river trout)
Pathway
stru03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115168887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115168887
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115168887
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_EML_2 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st eIF2A Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd BCAS3_WD40
Other DBs
NCBI-GeneID: 115168887
NCBI-ProteinID: XP_029580272
LinkDB
Position
30:24817952..24821469
AA seq 382 aa
MTAGVAVIRSDCAVWSFAWHPHTQKCAVSRXDDSIQIYNPKSATTPTLKHRLQRSVAALQ
RKPLCASALAVACHNCLLVWHVDPTSFSTRPSSGCAQVLSHPGHSPVTSMAWSPNGSLLV
SASPRDTAMLVWDVAVESCVPLXRVGGGGVTYLSWSPDVSRVLAATPSSLFRVWETRMWT
CERWPCLKGRCQSGSWSLDGSRLLFSVQGETVIYALTFTDTPGMPLGMSGGPKAATVVAD
LSKTTLNTPDGDMAVGGEIQSLAWDPTGERLAVLLKRDAEAGHPAMIAVFKTQINPAFKL
LPCGFVQGEAGTEPRLMQFNPSYQHGAQLTVCWSNGKITHMPFCFMSAGNPQPGLGGSPS
LPLSHGRPADYANQTLYTELIS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaccgctggtgtggcagtaatacggtcggactgtgcagtgtggagcttcgcctggcac
ccacacacccagaagtgtgctgtttcccgttaagacgactccatccagatctacaacccc
aagagtgctactactcccaccctaaagcaccgtctgcagcgcagtgtggcagccctgcag
cggaagcctctgtgtgcgtctgccctggccgtggcctgtcacaactgcctgctggtctgg
catgtggaccccacctcgttctctaccagaccctcttctggctgtgcccaggtcctgtcc
cacccaggccactcccctgtcacttccatggcatggtcacctaacggatctctcctggtg
tcggcctctcccagggacactgccatgctggtgtgggatgtagctgttgagagctgtgtg
cctctccgtgtgggagggggaggagtcacgtacctgtcctggtcccctgatgtcagtcgc
gtgctggcagctaccccctcctccctcttcagggtttgggaaaccaggatgtggacttgc
gagcggtggccttgtctgaagggacgctgtcagtctggcagttggagtctcgatgggagt
cggctgctcttcagtgtgcaaggagagactgtcatctatgccctaactttcactgacacc
ccagggatgcccttagggatgtcaggggggccgaaggcagcaacagtggtggccgacctg
tctaagacaaccttaaatacaccagatggagatatggcggtcggaggagagatccagtcg
ctagcgtgggacccgacaggagagagactagccgtgcttctcaaaagagatgctgaagca
ggccaccctgccatgatcgcagtgttcaagactcaaatcaaccccgcttttaagcttctg
ccatgtggttttgttcagggggaggccgggacagagcccagactgatgcagttcaacccc
agttaccagcatggagcccagctcactgtgtgttggtctaatggaaagattacccatatg
cctttttgctttatgagtgctgggaatccccagcccggcctgggaggcagcccctctctc
cccctgtcccatggcaggccagcagactacgccaaccagacactctacacagaactcatc
tcctaa

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