Salmo trutta (river trout): 115168978
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Entry
115168978 CDS
T08542
Name
(RefSeq) nuclease-sensitive element-binding protein 1-like isoform X1
KO
K09276
Y-box-binding protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115168978
03019 Messenger RNA biogenesis [BR:
stru03019
]
115168978
03041 Spliceosome [BR:
stru03041
]
115168978
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
115168978
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115168978
mRNA cycle factors
Common to processing body (P body) and stress granule
115168978
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
General mRNP proteins
115168978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
115168978
NCBI-ProteinID:
XP_029580423
Ensembl:
ENSSTUG00000044455
LinkDB
All DBs
Position
30:complement(5364959..5373920)
Genome browser
AA seq
326 aa
AA seq
DB search
MSSEAETQPPEPAVVDAESPSSPAEAAVSAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGEIVEFDVVEGEKGAEAANVTGPAGVPVQGSKYA
ADRNRYRRYPRRRGPARDGEYPDNYQSDGEGEGERPPRKSREGAESAPEGEMQTQQRRPS
FPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPMRQNYYRGFRP
RFRPSRGGGPPRPRPVRDGEGENKENQGGDGENQEPRQRRYRRNFNYRRRRPQTGGKPQD
GKEAKADGEPSLEKTSAPAAEQGGAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaaccgccggagcctgctgtcgtcgacgcggagagccca
tccagcccggcggaagccgccgtttccgcgggggataagaaggtcatcgcaactaaggtc
ttgggtacagtcaagtggttcaacgtcagaaatggctacggtttcatcaacaggaatgac
acgaaagaagacgtctttgtccaccagacggccataaagaaaaacaacccaaggaaatac
cttcgcagtgttggagatggagaaattgtggagtttgatgtggttgaaggggagaaggga
gcagaggcagccaatgtcaccggcccagcgggtgtcccagtccaggggagcaagtatgcc
gctgaccggaaccgctataggcggtacccccgcaggaggggcccagcccgggacggtgaa
tacccagacaactaccagagcgacggtgagggcgaaggagagcggcccccccgcaagagc
cgtgagggcgccgagagcgccccagagggagagatgcagacccagcagcgcaggccctcc
ttccctgggagacggcgctaccccccatactttgtacgtagacgctacggccgtcggccc
ccgtacaccaacgcacctcgcggagagatgactgagggtggcgaaggtgacgagaaccag
ggaggtccggaccagggcaacaaaccaatgaggcagaactactacagaggcttccgacca
aggttcagaccaagcagaggtggtggtccaccccgtcccagaccggtacgggacggcgag
ggggaaaacaaggagaaccagggtggtgacggcgagaaccaggagccccgccagcgccgc
taccgccgaaacttcaactaccgccgcagacgcccacagaccggtggcaagccccaggat
ggcaaggaggccaaggccgatggcgaaccatcccttgagaaaacatccgctcccgcagcc
gagcagggcggggctgagtag
DBGET
integrated database retrieval system
