KEGG   Salmo trutta (river trout): 115168981
Entry
115168981         CDS       T08542                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10-like
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
stru  Salmo trutta (river trout)
Pathway
stru03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115168981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115168981
   03036 Chromosome and associated proteins [BR:stru03036]
    115168981
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115168981
   Coactivators
    SAGA/TFTC/STAGA complex
     115168981
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115168981
    STAGA complex
     115168981
    TFTC complex
     115168981
    SAGA complex
     115168981
    SLIK complex
     115168981
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 115168981
NCBI-ProteinID: XP_029580439
Ensembl: ENSSTUG00000044537
UniProt: A0A674DTD5
LinkDB
Position
30:complement(5424526..5426541)
AA seq 185 aa
MNVDTPQPVITGGSSNSSTSNNCLTNNNAAINVSSIPSVAISNSPTTAAMATPSGTSVSN
GVYVPSGIANGDVKPVITTTPLADFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRL
VSLAAQKFISDIANDALQHCKMKGTASGSSRNKTKHDKKYTLTMEDLSPALSEYGINVKK
PHYFT
NT seq 558 nt   +upstreamnt  +downstreamnt
atgaacgttgatactccacagccagtcataacagggggctcttcaaattcctcgacatcc
aataattgcctcactaacaacaatgcagcaattaacgtcagcagcataccctcggttgcc
ataagtaattccccaaccacagctgccatggccacaccatctggcacatccgtgtccaac
ggcgtgtatgtgcctagtggcattgccaacggcgatgtgaagcctgtaatcacaaccaca
ccactggctgactttcttatgcaattggaggactacactcccacaatcccggatgcagtg
acaggctactatctcaaccgggccggctttgaggcgtctgatccgcgaataatccgactg
gtctccctcgcggctcagaagttcatctcagacatcgctaacgatgccctgcagcactgt
aaaatgaagggaactgcctcggggagctccaggaacaagacaaagcatgacaagaagtac
acactgaccatggaggacctctcccctgccctttctgagtatggcatcaatgtaaagaaa
cctcattacttcacatag

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