Salmo trutta (river trout): 115169248
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Entry
115169248 CDS
T08542
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
stru
Salmo trutta (river trout)
Pathway
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115169248
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115169248
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115169248
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C46: hedgehog family
115169248
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Morphogens
115169248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Hom_end_hint
Hint_2
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
115169248
NCBI-ProteinID:
XP_029580577
Ensembl:
ENSSTUG00000011119
UniProt:
A0A673XW00
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All DBs
Position
31:20295926..20299122
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AA seq
415 aa
AA seq
DB search
MDMMLMSIRLALVGFICLSLVSAGFACGPGRGYGKRRHPRKLKPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKNKYGMLSRLAVEAGFDWVNYES
KAHIHCSVKAENSVAAKSGGCFPGSASVLLEDGRSKLVKELEVGDKVLAADKEGHIVSSD
FLMFMDRDPVTSREFYVFETEKPNRKLRLTPAHLVFVTNNVTDGDMTAVFASNVKPGQQV
FVVDKALDHLKAVTVERIYVEEYEGSYAPMTSQGTIIVDHVLASCYAVIEDHKWAHWAFA
PVRLGHSLMSLTGLVKEREEIPQRDGIDWYSDILYHIGTFLLDRNSFHPLGMSQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacatgatgctgatgtcgataagacttgcgcttgtgggcttcatctgcctgtcttta
gtatccgctggtttcgcctgtggtccaggtaggggatatggaaaacgaagacatccgaga
aaactgaagcctttggcttacaagcagttcattcccaacgtggcagagaagacccttggg
gccagtggcaaatacgaagggaagatcacaaggaactctgaaagatttaaagacctgaca
ccaaactacaatcctgacattattttcaaagatgaggaaaacactaatgctgacagactt
atgacacagagatgtaaggacaaactgaactctttggctatttcagtcatgaatcagtgg
ccgggagtgaagctgagggtgacagaaggctgggacgaggatggacaccatttcgaggaa
tctttacactatgaaggaagggctgtggatatcaccacttctgacagagataaaaacaag
tatggaatgttatcccggctcgcggtggaggcgggattcgactgggtcaattatgaatcc
aaagcccatattcattgttctgtgaaagcagaaaactcagttgctgccaaatcgggtggc
tgcttcccaggatccgcctcagttcttctcgaggatggtcggagcaagctggtaaaagaa
ctggaggtgggcgacaaagtgttagccgcagacaaagaaggacatattgtatctagcgat
ttccttatgttcatggacagagatccagtaacaagtcgagaattttatgtttttgaaacg
gagaagcccaacagaaagttaagactgacgccggcacaccttgtcttcgtcaccaataac
gttacagatggcgatatgactgcagtgtttgccagtaatgtaaaacctgggcaacaggtg
tttgtcgtggacaaggcactagaccacctaaaggcggtcactgtggaaaggatttacgtg
gaagaatacgagggatcttatgccccaatgacttcacaaggaaccatcatagttgaccat
gttttggcgagctgttacgcggtaatcgaggaccacaaatgggcgcactgggcctttgca
ccagtccggttgggtcactcgttgatgtctttgacaggtctagtcaaagagcgagaggaa
atccctcagagagatggaatagactggtactcagacattctataccacatagggacattt
ctgctggacagaaactcctttcatcctcttggaatgtcacaaagttga
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