Salmo trutta (river trout): 115169357
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Entry
115169357 CDS
T08542
Name
(RefSeq) WD repeat-containing protein 47-like isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115169357
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115169357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WDR47_COR
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
LisH_TPL
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
TPR1-like_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_SPT8
UPF0242
Motif
Other DBs
NCBI-GeneID:
115169357
NCBI-ProteinID:
XP_029580757
Ensembl:
ENSSTUG00000016219
LinkDB
All DBs
Position
31:3598149..3625575
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AA seq
942 aa
AA seq
DB search
MTAEEIINVKEVEIIKVILDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLVLDGQ
WDEVLQFIQPLECMDTFDRKRFRYIVLKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVKC
LHALEEVCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACTMVAEFIPADR
KLSEAGFRASGNRLFQLLIKGVLYECCVEFCQSKATGEEITEGEVLLGVDMLCGNGCDDL
DLSLLSWMQNLSHSVFSCAFEQKLLQIHVDRLVKPAKAGYADLLTPLISKLSPYPSSPLR
RPQSADAYMSRSLNPALDGLSYGLSGQEKRGPGGDTAGGKGVSPMSHSFANYHTGGQSLS
RSLMLESSDCHSIFEESPESSRTDTPVDKMMSSGTLRPDSAPGEDAPLPGSAERNEVKHL
MEERKMRCNQLQDSTEKFEEFYRQRLRVQQHLEQKQQQRQLYQQMLLEGGVQHSDQPAPG
TDAAQHSLTETFLNRSIQKLEELNVGMESLEEDVQSLAQQCNGTGPSPENNNIGDPVGLT
PDPAVTLTPEQGQPHGGGVVSSTPQRTAAGRGVPPPNESPVVSQSPQVAGQPSALDDSPG
ARTRSKEGDNGDKPKALFVAVNTLEDTQAVRAVAFHPTGALYAVGSNSKTLRVCAYPDAP
LDTSGVSGMTKQPEVRFKRNKHHKGSIYCVAWSHCGKLLATGSNDKYVKVLPFSAETCNA
TGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGH
VLSLYTWGGWMIASGSQDKTVRFWDLRIPTCVRVVGTAFHGSGSPVASVAVDPSGRLLAT
GQEDSGCMLYDIRGGRVVQTYRPHSSDVRSVRFSPGAHYLLTGSYDTKVMISNLQGDLTK
PLPLTLVGEHGDKVIQCRWHTHDLSFLSSSADRTVTLWTHNP
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagaggagatcatcaatgtgaaggaggtggagatcatcaaggtgatcctggac
ttcctcaactccaggaaacttcacatcagcatgctggccctggagaaagagagcggagtc
atcaacggactgtactctgacgacatgctgttcctcagacaactggtgttggatgggcag
tgggacgaggtgctccagttcattcagccgttggagtgcatggacacgtttgacaggaaa
aggttccgttacatcgtcctgaagcagaagtttctggaggctctgtgtgtgaacaacgcc
atgtctgctgaggacgagccacagcatctggagttcaccatgcaggaggcggtgaagtgt
cttcatgccctggaggaggtctgtccctctaaagatgactacagcaagctatgtctgctc
ctcaccctgcctcgtctcaccaaccacgctgagttcaaggactggaaccccagcacggcg
cgagtgcactgttttgaagaggcgtgcaccatggtggcagagttcatccctgcagacagg
aagctgagcgaagcggggttcagagcctcagggaaccgcctcttccagctactcattaaa
ggagttctgtatgagtgctgcgtcgagttctgccagagcaaggcgacaggcgaggagatc
acggagggcgaggtgctcctgggggtggacatgctgtgtgggaatggctgtgatgacctg
gacctgtccttactctcctggatgcagaacctgtcccacagcgtcttctcctgcgccttc
gagcagaagctgctccagatccacgtggaccgcctggtcaagcccgccaaggccggctac
gccgacctcctcaccccgctaatcagcaagctgtccccctacccctcctcgcccctccgc
cgcccccagtccgccgatgcctacatgtcccgctccctgaacccggccctggacgggctc
tcctatggtctgtctggccaggagaagaggggcccagggggggacacggcgggggggaag
ggggtgtcccccatgtctcattccttcgctaactaccacacggggggccagagtctgagc
aggagtctgatgttggagagctccgactgccacagcatctttgaggagtcgcctgagagc
tccaggacggacacgcccgtggataagatgatgagttcgggcaccctgcgccctgactcc
gcccctggagaggatgccccattaccaggctctgcagagaggaacgaggtaaaacacctg
atggaggagaggaagatgagatgtaaccagctgcaggactcaacagagaagtttgaggag
ttttaccgccagcgtctgagagtgcagcagcacctggagcagaagcagcagcagagacaa
ctctaccagcagatgcttctggagggaggggtacaacacagtgaccagccagcccccggg
acagacgccgcacagcacagcctcactgagacgttcctcaacaggtctattcagaagctg
gaggagttgaacgttgggatggagagtctagaggaggatgtccagtctctggcccagcag
tgcaatggtacgggcccctctcctgagaacaacaatatcggtgaccccgtaggcttgacc
cccgaccccgccgtgaccctgacccccgagcagggccagccccatggaggaggggtggtc
agcagcaccccacaacgcaccgcagcgggtcggggcgtacccccacccaacgaatctccc
gtggtctcccagagtcctcaagtagccggacagccttccgcattagatgactcaccagga
gcccgaacccgaagtaaggagggggacaacggggacaagcccaaggccctgtttgtagct
gtgaacaccctggaggacactcaggcagtgcgtgctgtagccttccaccccacgggggcg
ctatacgcggtcggttccaactccaagacgctacgcgtgtgtgcctacccagatgcaccg
ctggacaccagtggggtgtcgggtatgaccaagcagccggaggttcgttttaagaggaac
aagcaccataagggttctatctactgtgtggcctggagtcactgtggaaagctgctagcc
accggctccaatgacaaatacgtcaaagtcctgcccttcagtgccgagacctgcaacgcc
acaggtccagaccttgagttcagtatgcatgatgggaccatcagagacctggcgttcatg
gagggaccagagagtggaggggccatcctgatcagtgccggagccggagactgtaacatc
tacactactgactgtcagagaggacagggcctacacgctctcagtggacacacaggtcac
gttctgtctctgtatacatggggagggtggatgatagcgtcaggctctcaggacaagact
gtgaggttctgggacctgagaatacccacttgtgttagagtggtgggcactgccttccat
ggatcaggcagccccgttgcctcggtagcggttgaccctagcggtcgtctcctagcgacg
ggacaggaggacagcggctgtatgctctatgacatcagagggggacgcgttgtgcagacg
taccggccccactccagcgacgtgcgctccgttaggttctcccccggggcacactacctg
ctcactggttcctacgacaccaaggtcatgatcagcaacctgcaaggtgacttgacgaag
ccgttgcccctgactctggtaggggagcacggtgacaaggtgatccagtgcaggtggcac
acacacgacctgtccttcctgtcctcctctgctgaccgtaccgtcacactctggacacac
aacccctaa
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