Salmo trutta (river trout): 115169359
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Entry
115169359 CDS
T08542
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115169359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115169359
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115169359
Complex C
U4/U6.U5 tri-SnRNP related factors
115169359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
115169359
NCBI-ProteinID:
XP_029580764
Ensembl:
ENSSTUG00000016500
UniProt:
A0A673YWR2
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Position
31:complement(3685119..3702864)
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AA seq
475 aa
AA seq
DB search
MANNTVAGNQQQPQAVSKIGPNAGKHGNNLPLWGNEKTMNLNPMVLTNVLSSPYFKVQLY
ELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
IKMTRKQVMGLITHNDSPYIRALGFMYIRYTQPPADLVDWYDGFMDDEEELDVKAGGGCV
MTIGEMVRSFLTKLEWFSTLFPRIPVPVQKMIDTQMKARPRKVPEKVEEPEEPPTEGRRR
SRSPRRTPSPRRTPKRSRSRSHHRERERHGPSFDRELERERDRQKKERDSGDGKGGERER
RRSRSADCAQERRERRRSCSGSRERKGERKDREKDGQGGMENDRKKDREYHKDGGSERER
SKDKRSKGEVEDRRQKEERDERRGHREERKAKRSSRSASRERRHKEKSIKRQVQEESRGR
AEVGEKEKSRKKQCSREGEQRSHKHSRSKERSHRPREPSNGKDHGERKTSQSTER
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacactgtcgctggaaaccagcaacaaccacaggccgtgagcaagattggc
cctaacgctggaaaacatggcaacaacttgcctctctggggcaacgaaaagactatgaac
ttgaaccctatggttctcaccaacgtgctctcatctccatatttcaaagttcagctgtat
gaattgaaaacctaccatgaggtggtggatgagatctatttcaaggttactcacgttgag
ccctgggagaaaggcagtaggaagactgcagggcagactggaatgtgcggaggggtgcgg
ggagtcgggactggcggcattgtgtccacagccttctgcctgctctataaactgtttacc
atcaagatgacccgtaaacaggtgatgggactgatcactcacaacgactcaccctacatc
agagcacttggctttatgtacataagatacacccagccccctgcagacctggtggactgg
tatgatggtttcatggatgatgaggaggagctggatgtgaaggccggaggtggctgcgta
atgaccatcggagagatggtccggtcgttcctcaccaagctagagtggttctccactctc
tttccacgcatcccggtgcccgtgcagaagatgatcgacacgcagatgaaggcaaggccc
cggaaggttcccgagaaggtagaggagccggaggaaccaccaacggagggccgtagacgc
tccaggagccccagacgtaccccgagccccaggaggactcccaaacggtcgaggagccgg
agccaccaccgcgaacgagagcgccacggccccagcttcgaccgcgagctggagagggaa
cgcgaccgccagaagaaagagcgggactctggggacgggaaaggaggcgagcgggagagg
cgccggtcccggagcgcagactgtgcccaggagcgccgggaacgtcgcaggagctgcagt
gggagccgggaacgcaagggagagcggaaagacagggagaaagatgggcaggggggcatg
gagaatgacaggaagaaggacagggagtaccataaagatgggggcagcgagagggagagg
tccaaggacaagaggagcaagggagaggtggaggacaggagacaaaaagaagagagagat
gagaggaggggtcacagggaggagaggaaggccaagcgctccagtcggagtgcaagcagg
gaaaggagacacaaggagaagtccataaagcgacaagtccaagaagagagcagaggcagg
gctgaggtaggggagaaggagaagagcaggaagaagcagtgcagccgggagggggagcag
cgctcgcacaaacacagccgcagtaaagagcggagccatcggccacgtgagcccagcaac
gggaaagaccacggggagcgcaaaacgagccagagcacagagcgatga
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