Salmo trutta (river trout): 115169597
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Entry
115169597 CDS
T08542
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115169597
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115169597
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115169597
03029 Mitochondrial biogenesis [BR:
stru03029
]
115169597
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115169597
Membrane trafficking [BR:
stru04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115169597
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115169597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115169597
NCBI-ProteinID:
XP_029581219
Ensembl:
ENSSTUG00000050194
LinkDB
All DBs
Position
31:14318944..14338112
Genome browser
AA seq
1636 aa
AA seq
DB search
MKLYVFQVNNGSTLAFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYINYQQ
DFEDIKLKLTRLGTAVSVMAKIPLLECLTRHSYKECIEKSCSTPNKDSDETVEEKSTDSV
LCPTPTKLPASFSAPGAGCSPDTAEGQESSEMTDSSGLRAALQEADSPERVNPLSFNVTL
LDWINVQDRPNDVESVVRKCFDSINRLDPRVIQPFLAECRDTIAKLDNQNMKAIKGLEDR
LYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIMLTNHR
KLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRVVDA
LSTVPQMYCLAVVEVVRRKLFIGHYREWACALVKDGKHLYETEKYKRETFGKLFRKSFLR
NRLFRGLDSWPPTSFCTRKPRKFDFELPDISLGDLQYLKTCCPTEVQPFLRVPTLCDFEP
LHLHVEMLQQLVLASQAASVDEMSQTITDLLSEQRGSCSQSAQRSTAAVTPRSDSTPGTS
SSKTPSSLSLPGPPCQPLPGPTALEDLSPDSIDAQTFDFETIGHPNMDPVLQQAGSLDLD
SLVESPESDFLSAVNEFVIENSPTPISDPTSPEMMVESLYSSVINAIDSKRMHDTTTLER
ENSKVAMLKLSIEKYRSAAEESQANLRSVKDDLYRFRGLVLKEQRDFGFALKTMTIEVRN
MVDTIRKREEEELREQHQAELLSVQQDHKKQLQALTEESRVNRNIVKDVQRAMLELEGLL
ERKEKELTQLEAERQRWTEAESGHTQRLRVLEQKISDQAQEVLTVAASRDSLYSQLETLH
IEIERGQQKIRQELEGAEQSHLQELEERMRQQHQAQLDTLARENQEAMECLATVNSVKLS
EVADRHAASLTERDGQLRDLEARATELADLRCKLEVELALKESEMEVVRLLYEEAKQGQQ
EANVRKATVEAETQSLNEQLVQVNGQLHAKNEEYEKGLAELRMLMRMEKDQCISELVGRH
EEERNQHLSELTTLQQQAQDAGRSHAEQLQNLQLDLDLQTAALRNDKEVQQRRFEEQEQH
LRTVICDLQTENDLLTKRLEQDTQAAQEPLEKEESLKAAVPDAFKDFEQQKEEMEKRLLD
KIRQLENELQERQSSEREAGLSKVQTEGRGSEAGAPLSLDSALQERLQQETASLHTQLEL
LERRKDEEMQNLKTSLIAEQQTNFNTVLMREKLKKEQIISDLTEELRNVTQQQEKDKGLI
EMLSEDRAIVMQEKKQLEEELNRLRSTALVSSAYYSPNPLALEPTGAGARLGPGAFPGPG
TEVEVGAGACSSELFPDPDRLASVAATREDDRVDSAVEASMVTVHDNILMMSEEKQRILL
LERTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLF
TVGPTLYFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPL
GTKFYRVKAVPWNKKV
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggaagcactctggcatttgacacagagctt
gctgtccaaacagtgttggacctcaaacatgccatccaggtcaaatacaagattgcaacc
cagcatcaagttctggttgtcaatggaggggagtgtatggttgcagagaggagagtctgc
agctacagtgccggcactgacaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggctccgacgatccctaaaaccaccttctctattgagaatgagatggagctc
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctcgcgaacacaa
cttgctgtggaaatgtttgaagtcgccaagaaactttgctctttctgcgaacgcctggtt
cacgatgaacacctccaacaccaaggttgggctgccatcatggccaacctggatgactgc
accctgtcttatcagaagctactgtggaaatttgacacggcgtacattaattatcaacaa
gactttgaggatatcaaattgaaactgacaagactggggacagcagtttcagtcatggcc
aagatccccctgctggagtgtctgacccgccacagctacaaagaatgcatagagaagtcc
tgctccactccaaacaaggactctgacgagaccgtggaggagaagtccaccgactcggtg
ctctgccccacccccaccaagctacctgcatcgttctctgctccgggggctgggtgctcg
cccgacaccgccgaaggccaggaaagcagtgagatgacggacagtagtgggctgagggca
gccctgcaagaggcagactctccagagagggtcaaccccctgtccttcaacgtcacactg
ctggactggatcaacgttcaagacaggcccaatgacgttgaatcagtcgtgaggaaatgc
tttgactccatcaataggctcgacccacgggtcattcaaccattcttagcggaatgtcga
gacacgattgccaaactggataatcagaacatgaaagccatcaaaggacttgaggacagg
ttatacgctctagaccaaatgatagcgagctgtaaaaagttggtcaatgaacagaaggaa
cttgctcagggatttctggccaatcagaagcgtgctgagaacctgaaggatacgtccgtg
ctgcctgacctgtgtctcagtcacgccaatcagctgatgatcatgctgaccaaccacagg
aagctgctggacatcaaacagaagtgcaccactgccaaacaggagctggcgaacaaccta
caagttcgtctcaaatggtgctgctacgtgatgctgcacgcggaccaggatggggagaag
ctgcaggccctgctgaggctgctgaccgagctgatggagagagtccgggtggtggacgcc
ctcagcaccgtgcctcagatgtactgcctggctgtggttgaggtggtccgcaggaagctc
ttcatcggccactacagagagtgggcctgtgctctggtgaaggatggaaagcatctctat
gagactgagaagtataaaagggaaacgtttggcaagttgttcaggaaatcttttctccga
aatcggttgtttagaggacttgactcatggccccccacttcattttgcacaagaaagccc
agaaagtttgactttgagcttccagatatttcccttggtgacctgcagtacttaaagacc
tgttgtcctacagaggtgcagcctttcctcagggttccaacactgtgtgattttgagcct
ttgcatctgcatgtggagatgcttcagcagttggtccttgcttctcaagctgcaagtgtg
gacgagatgtctcaaactatcaccgatttactgagcgaacaaagggggtcgtgcagccag
agtgctcagagatccacggcagcggttaccccacggtccgacagcaccccagggacttcc
tcctccaagaccccctcctctctcagtctcccggggcccccctgccagcccctccctggc
cccaccgccctggaggacctgtccccggacagcatcgatgcccaaacttttgacttcgag
acaattggccaccccaacatggaccccgtcctgcagcaggctggctccctggacctggac
tccctggttgagagccccgagtcagacttcttgtcggcggtcaacgagtttgtgatcgaa
aactcgcccacccccatcagcgaccccaccagcccagagatgatggtggagtcgctgtac
tcgtcggtcatcaacgccatcgacagcaagcgcatgcatgacaccaccaccttagagagg
gaaaactccaaggtggctatgttgaagctgagcatcgagaagtaccgctctgctgccgag
gagtcccaggccaacttgcggagcgtcaaggatgacctgtaccgcttcagaggcctggtg
ctgaaggagcagcgagactttggcttcgccctgaagaccatgaccattgaggtgcgcaac
atggtggacaccatccgtaagagggaggaggaggagctgagggagcagcaccaggccgag
ctcctctctgtgcagcaggaccacaagaagcaacttcaggccctgacggaggagagccgg
gtgaaccggaacatcgtgaaagacgtgcagcgggccatgctggagctggaggggctgctg
gagcgcaaggagaaggagctgacccagctcgaggctgagaggcagcgctggaccgaggcg
gagagcggacacactcagaggctcagggtcctggagcagaagatcagcgatcaggcccaa
gaggtgctgaccgttgctgcctccagagactccctgtacagccagctggagacactccac
attgagatcgagcgcggccagcagaagatccgccaggagctggagggggccgagcagtcc
cacctgcaggagctggaggagaggatgaggcagcagcaccaggcccagctagacaccctg
gcccgggagaaccaggaggccatggagtgcctggcaacggtgaacagtgtcaagctgagt
gaggtcgcagaccgccacgccgcctctctaacagagagggacggccagctgagggatctg
gaggcccgggcaaccgagctggctgacctacgctgcaagctggaggtggagctggccctg
aaggagtcagagatggaggttgtgaggctgctctatgaggaggccaagcaggggcagcaa
gaagccaacgtgaggaaggccactgtagaggcagagacccagtccctcaacgaacagcta
gttcaggtcaacgggcagctgcatgctaagaacgaagagtacgagaagggcctggccgag
ctccggatgctgatgcgcatggagaaagaccagtgcatctcggagctggtgggaaggcac
gaggaagagaggaaccagcacctcagcgagctgaccaccctgcagcagcaggcccaggac
gcaggaaggagccacgcagaacagctgcagaacctccaactagacctcgacctgcagacg
gcagcactgcgcaacgataaggaagtgcagcagaggaggtttgaggagcaggagcaacac
ttgaggactgttatctgcgatttgcagacagaaaatgatctgctcaccaaaagattagag
caggacacccaagcagcccaggaacctttggagaaagaggagtctttgaaggctgcagta
ccagatgccttcaaagactttgagcaacaaaaggaggagatggagaaaagacttctagac
aaaattagacaacttgaaaatgagcttcaggaaagacaatcctcagaaagagaggcaggg
ttgtcgaaggtgcagacagagggtcggggatccgaagcaggagctcctctctccctggac
tctgccttgcaggagcgtctgcagcaggagacagcctccctgcacacccagctggagctc
ctggagaggaggaaggacgaggagatgcagaacctcaagacctccctcatcgcagaacaa
cagactaacttcaacactgttctgatgagagagaagctgaaaaaggaacagatcatcagt
gacctgacagaggagctacggaatgttacccagcagcaggagaaggacaaaggtctgata
gagatgctgtctgaggaccgggccatcgtcatgcaggagaagaagcagttggaggaggag
ctgaaccggctgcgcagcacagccctggtatcctctgcctactacagccctaacccctta
gctctagagcccactggagccggggctagacttggacctggagcatttcctggacctggg
actgaagttgaggttggggctggagcctgctcctctgagctcttccctgacccagacaga
ctggcctctgtggctgccaccagagaggacgacagagtggactcggctgtggaggccagc
atggtgactgtgcacgataacatcctgatgatgtcggaggagaaacagcggatactgtta
cttgagaggactttacatatgaaggaagaagaaaacaagcgcctcagtcaaagactgatg
tctcaaagcatgtcctcggtgtcatcacggcattctgagaaaattgccatcagagatttc
caggttggcgacttggttctgatcatcctagatgaaaggcatgacaactatgtgctattc
actgtgggtcccaccctgtactttctccactctgagtccctcacggcactggacctcaaa
ccagatcctatgtttacttcagcatcaggagcctcgagacggccgtgggttcttggaaaa
gttatggagaaagaatattgccaggcgaaaaaggctcaaaaccggttcaaagttcctttg
ggcaccaagttctacagggtgaaagctgttccgtggaacaagaaagtatag
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integrated database retrieval system
