Salmo trutta (river trout): 115169650
Help
Entry
115169650 CDS
T08542
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115169650
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115169650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
HrpB1_HrpK
TPR_10
Cep57_CLD_2
PhiKZ_gp35
Motif
Other DBs
NCBI-GeneID:
115169650
NCBI-ProteinID:
XP_029581383
Ensembl:
ENSSTUG00000003785
UniProt:
A0A673W7B0
LinkDB
All DBs
Position
1:complement(15923609..15933616)
Genome browser
AA seq
820 aa
AA seq
DB search
MEDIDEPMTGMLDTDSSESGDSPAMEGNGDGFLPDLPVLTHPAEWTMDQVPPDNLTTVIH
DTDSESDQSSPEVIKQHQDQQSDLGSVEQAVQHFQLASAKLFQEEDSDDQFCSPPVEQQN
QMDASSEEESKDGQNNQANATESLMQGESLMRGEKMSEAVEQQRDPAQAQPPIVAEDGSP
ANMELEESKEMTEQGEPVEVPAEEPAVPTEPLIPAEYEKLVKGCEENPEDFNGWVYLLQY
VEQENHLGVVRKAFDAFFLHYPYCYGYWKKFADMEKKHGNVQVAEEVYRRGVQAIPLSVD
LWLHYMSFIKDNADHEDPETPGRIRAAYEHAVLAAGTDFRSDRLWEAYINWETEQEKLAN
VTAIYDRILGIPTQLYSQHLQRFKEHVQNNNPKHFLSEEEFVQLRVELAKANVAAAANGE
GEEATPAEELPPGTEDLPDPAKRVTEIENMRHKVIESRQEVFNQNEQEVSKRWAFEEGIK
RPYFHVKALEKTQLSNWKEYLDYEIENGTPERVVVLFERCLIACALYEDFWTKYAKYIEG
YSIDGVRHVYKKACTIHLTKKPNIHLLWAAFEEQQGNIAEARRILKALEAAVPALAMVRL
RRVSLERRHGNLEEAEALLREAIASGKNTSEMSFYAVKLARQLLKVQRSLAKARKVLLEA
IDKDQASAKLYLNLLELEYSGDVQQNEVDILACFDRALSSPLPLDSRLTFSQRKVEFLQD
FGSDINKLVTAYDEHQKLLKENESAKRKAENGSQETESKRQRTDEHSGSGHMMQGDVQGN
NSAYNYNWYQQQYNNWGQNSWGQYNQYSQQYNQYYPPPPT
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattgacgagcccatgacggggatgttggacacagacagctctgagagtggg
gactccccagccatggagggcaacggagatggtttcctcccagacctgcctgtcctcacg
caccctgctgaatggaccatggaccaggttcctcctgacaacctcaccacagttatccac
gacactgactcagagtcagatcagtcgtcaccggaggtaatcaagcagcaccaggaccag
cagtctgatctgggatcagttgaacaagcagtgcagcacttccagctagcgagtgccaag
ctcttccaagaggaggattcagatgatcagttttgttctcccccggtagaacaacagaac
caaatggatgcgtcgtcagaggaagaaagcaaggatggacagaacaaccaagcgaatgcc
acagagtctttgatgcagggtgagtctttgatgcggggtgagaagatgtcagaggctgta
gaacagcaacgagatccagcccaagcccagccaccaattgttgcagaagatggaagccca
gctaacatggagctggaagaatccaaagagatgaccgagcagggggaacctgttgaggta
ccagctgaggaaccggctgtccccacagagcccctcatccctgctgagtatgagaagctg
gttaaagggtgtgaggagaaccctgaagacttcaatggttgggtctacctgctgcagtat
gtggagcaagagaatcatcttggtgttgtgaggaaggcgtttgatgcgtttttcctgcac
tacccctactgctacggctactggaagaagtttgctgacatggagaagaagcatggcaat
gtgcaggtggcagaggaggtgtaccggcgaggtgtgcaggccatccccctcagtgttgat
ctgtggcttcactacatgtccttcatcaaggacaacgctgaccatgaagacccagagaca
ccaggacgcattagagctgcgtatgagcatgctgtgttggcagcagggacagacttccgc
tctgaccgtctgtgggaggcctacatcaactgggagacggagcaggagaaactggctaac
gtcacggccatctacgaccgcatcctgggcatccccacccagctctactcacagcacctc
cagaggttcaaagagcatgtgcagaacaacaaccccaaacacttcttgtcagaggaggag
tttgtccaactgagggtggagctagccaaagccaacgtagcagctgcagccaatggggaa
ggagaggaagcaacacctgctgaggagctcccgccaggcaccgaagacctcccagatcct
gcaaagagggtgacggagattgagaacatgcgacacaaggtgatcgagtcgcgccaggag
gtgttcaaccaaaacgagcaggaggtcagcaaacgctgggccttcgaggaagggataaaa
cgcccctacttccatgtcaaagccctggagaagacccagctcagcaattggaaggagtac
ctggactatgagatcgaaaacggcactcccgaacgtgtggtcgttctgttcgaacgctgc
ctcatcgcctgtgctctttacgaggacttctggacaaagtatgcaaaatatatagaaggc
tacagcattgatggagtgagacatgtgtacaagaaggcgtgtaccatccacctgaccaag
aagcccaatattcacctgctgtgggccgcattcgaggagcaacaggggaacatagcggag
gcgcgccgcatcctgaaggctctggaggctgcggtaccagccctagctatggtgcgtctg
cggcgggtcagcctggagcggcgccacggcaacctggaggaggcggaggccctgctgagg
gaggcgattgcgtcggggaagaacaccagcgagatgtcgttctacgccgtgaagctggcc
cggcagctgctgaaggtgcagagaagcctcgccaaggcccgcaaggtgctgctggaagcc
atagacaaggaccaggcgagtgctaaactgtatctgaacctgctggaactggagtacagt
ggggacgtgcagcagaacgaagtggacatcttggcctgctttgaccgtgccctgagcagc
ccgctgcctctcgactcccgtctcaccttctctcagcgcaaggtcgagttcctccaggac
tttggcagcgacatcaacaagttagtgactgcgtacgatgaacaccagaagcttctgaaa
gaaaacgagtcggcaaagaggaaagcagagaatggctcacaggaaaccgagtcgaagaga
cagcgtacagacgagcactcaggctcagggcacatgatgcagggagatgtgcagggtaac
aactctgcctacaactacaactggtaccagcaacagtacaacaactggggacagaactcc
tggggacagtacaaccagtattcccagcagtataaccagtactacccccctccacccaca
taa
DBGET
integrated database retrieval system
