Salmo trutta (river trout): 115169791
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Entry
115169791 CDS
T08542
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115169791
04518 Integrin signaling
115169791
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115169791
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
CCDC39
Death
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
115169791
NCBI-ProteinID:
XP_029581599
Ensembl:
ENSSTUG00000018487
LinkDB
All DBs
Position
31:23832778..23903447
Genome browser
AA seq
1594 aa
AA seq
DB search
MRWFIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINV
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATSHGGHCRNCADYT
DGPNCERCLDNYYRDTSGTRCLPCSCNPVGSLATQCDNTGRCSCKPGVMGDKCERCQPGF
HTLTDAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDAVSSTFDRDDERWTGQQRDGSSVSVQWSAGGEISLISDDYF
PMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLIT
ARRGPGSPARWVEKCTCPQGYVGQHCERCALGYRRSRPDLGPFSSCDSCNCNGHSDTCNP
DTGMCDCQHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGENGQVRVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFYGNPLAINPNDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNPIGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCACLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKSIMDLLDEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAEDLIGRAREELDKA
KEAISKLDIKAPSISGDPNNMTLLAEEARNLANKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEDAEKIASAVQKGSAKTKADAEKAFEDTM
ILDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKDTLPDGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggtttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcaaactatgttagcgggcatccagtatccacactcaatcaatgta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagtttcgccatctacaagcgcacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacagcaggccctgtgtacagacgagttcagcgacatctcacccctg
accggaggaaacgtcgccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccactgatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactac
gctatctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgccagtgagtgt
gcgaaaaacaacggtttcggcaagccggtttgcaactgcaagcacaacacagagggcgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctgtaccgtgccaccagccacggaggacactgccgcaactgtgccgactacaca
gacgggcccaactgtgagcgctgcctggacaactactacagagacacatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggccactcagtgtgacaacacggga
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaacgctgccaacctggcttt
cacacattgaccgacgcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccgcagaaccctcagggttgcactccg
tgcttctgcttccagcattcctctgtctgtgacagcgctgaaggctacagcattgacgca
gtctcctccaccttcgaccgagatgatgagcggtggacaggccagcagcgtgacggctcc
agtgtttcagtccagtggtccgctggtggagagatctccctcatctccgatgactacttc
ccaatgtactttgtggctccagagaggttcctgggcaatcagctgctgagctatggccag
aatctcaccctgaacttccgggtggacaggagagacacgcgcctctcagccgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cctggagagaacatgcagacctttgtgttcaggctccacgacagcacagactacccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagagaagtgctggttaccttgacgatgtgaagctgatcacg
gcgaggagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcaaggc
tacgtgggacagcactgtgagaggtgcgccctgggatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcaactgtaacggacacagtgacacgtgcaacccc
gacacagggatgtgtgactgccaacacaacacagctgggctcagttgtgagaggtgtaaa
gacggttactatggagactccactgtggggagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagaccaaggaagttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgcgagctgtgtgatgacggtttcttcggagacccc
ctgggggagaacgggcaggtgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtgggcaactgtgaccgagagaccggggagtgcctcaagtgtatctacaac
acagacggcttcttctgtgaccgctgcaaagagggcttctatggaaaccctctggccatc
aaccccaacgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacag
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagcgcctgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacagtgc
aactgcaatcctattgggtccaccaacggtcagtgtgacatcggttccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcgctgtgaacgttgtgaggttaacttcttcggattc
ggattgtcaggctgcaaaccgtgcgactgtgacccagagggctcctcgacggcccagtgt
aaggaagatggccgctgtgcgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgttctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgatctgcagactttg
attgacaacctgggctccacgtcagagactgtgagtgacaaggcatttgaggaccgactg
aaggaggcagagaaatccatcatggacctactggacgaggctcagaccagcaaagatgtg
gacaaaggcctgctggagcgcctggggaaactgaacagcacactgaccactcagtggaat
cgtctgcagaacatcaggaacaccgtggacaacaccggaacccaggccgacaaggcccgc
aaccgggtccgagacgccgaggacctgatcggccgcgcccgcgaggaactggacaaggcc
aaggaggccatcagcaaactggacatcaaagcaccctcaatcagtggagatcctaacaac
atgacccttctggcagaggaggctcgcaatctggccaacaaacataaaatggacgcggat
caaattgagaagatcgccaaggatgccaacgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggatctggccaagaacctggagaaacaggccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcatctgac
ctggacaagctgattgacaagaccgagaaagagtacaacgacttgagggatgacctgaga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaggcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaagacattctgggaaatctgagagactttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcatcgcggccaatgagaagaccaagcaggctgagggggcgctaggcaacgca
gctgcagacgccaaggaggccaagagcaaggcagaggatgcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaagcctttgaggacactatg
atactggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcagacaat
gcgaaggaagcggaggacaacgcccgcaaagccaagagtgctgtcaggaccgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaagggtcgctgaagcaggccaaggacaaaatggcgaacagcgacctggac
cgcaagctggcggagctgaacgacgtggccaagagccaggaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaacgacatcaaggacact
ttacccgacggctgcttcaacaccccatccctagagcgaccttaa
DBGET
integrated database retrieval system