Salmo trutta (river trout): 115169792
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Entry
115169792 CDS
T08542
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115169792 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115169792 (smg7)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115169792 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
115169792 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
115169792
NCBI-ProteinID:
XP_029581600
Ensembl:
ENSSTUG00000019502
UniProt:
A0A673ZYE7
LinkDB
All DBs
Position
31:23935138..23961222
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AA seq
1182 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDFKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQTNTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALAKAVESRDEVK
TKWSVSDFIKAFIKFHGHVYLSKSLEKLNNLREKLEEQFQRLILQKAFSSQQLVHITIIN
MFELHHLRDFGNEADDQSFSSEEQIGWLQLLGLFMSFLGVMCSRALLNKNRGEEIMGECP
LPAIKVSLDWLKLRPTVFQDGAVDRRQYVWPWLVSILNSFQPKEDDVSCASMTPLPEEFE
LQGFLALRPALRTLDFTKGHQGVAVDKEGLPVRARHQRLISLGKWVADNQPGLIQYKVSD
GLLLFITDIEELAIEEPQEKDAPVLQESSNSEQTPNEGNMGLKSVLSMGKTQNSVLEIGE
RPVVTFKENIKPREQSREPSRNHHQKEAGKERRDFGKGNGVPGKGEQKRDGKRKSEVKKN
SHEKAADAGKQVKAQLDMRKTPVSEARKTPVTQTQTTCSSQFIPMYHPGAFPPLPSRQGF
PPPAYVIPPPVAFSMNPGFTFSTGMSVPGPFLQSASHPQQPGAQQQVQVQAGKPSHIPYS
QQRPSVPGAMNQGAPQGQGQQQPSQTMQLQVQALVQQQQSPTKPVQPVQLGKSPPHHPGM
QQYMQVDQAGQMWGQHQAQQHQTQPTMQKMQAMQMPVKQPYYMGSPQDPLKLFEQQQYAM
QTVPQQNSMDKKMKYPDVKMQDFYWDPSYRVGDNRPMVGERMSKRLPPGAFHPDQDNTPR
GPPFEDKSSPLLPPDLLKSISDFEEEEELAFTKPHGFYQALTGPLSTAPGRNIFLPNQSR
MESGSEVMGQSSSLMPLSGFPIQESSYQNNSIFSQAYGKNMAPNPKPDAPMLHQEPSLYS
LFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHGSIPFSNFGPIGTPDNRD
RRMVDRWKVEKTPVSGFGLDYLPAASSSSDHRTPENSWHQGNAPSSSWAAQELPMEDSST
VLLDSLKSIWSSSMMQPGPSALEQLLMQQKQQRGRGTMNPPH
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccaatatttacggcaggcagaggccctgaaggctgacatgacagat
tttaagcttggtgcagcagaggtctggacttcaaggcaagcgcttcaggacttgtaccag
aagatgctggtgactgacctggagtatgctttggacaagaaagtggagcaagatctctgg
aaccatgcttttaaaaatcaaataacaacactacagagtcaagccaagaaccgagccaac
cctaatagaagtgaggtgcaggccaatctgtccctatttcttgaggcagctagtggattc
tacacacaattactacaggagctgtgtactgtgttcaacgtggacttgccttgccgtgtg
aagtcatctcagcttggaattatcagcaataaacagaccaacaccagcgccattgtaaaa
ccccaacccagctcttgctcttatatctgccagcattgtctcgtccacctcggagacatc
gcacgatatcgcaaccaaaccagccaggcggagtcctattacagacacgcagctcaactt
gtcccttcaaatggtcagccttacaatcagctggccatcctggcctcctctaaaggggac
cacctcacaacgatattctactactgcaggagcatcgccgtcaagttccctttccctgca
gcctccaccaacctgcagaaagctctcgctaaagccgttgaaagccgtgatgaggtcaaa
acaaagtggagtgtgtcagatttcatcaaggccttcatcaagttccatggtcatgtttac
ctgagcaagagcctggagaagcttaacaacctgagagagaagctggaagaacagtttcag
cggttgattctgcagaaagccttcagctcccagcagctggtccacatcacaattatcaac
atgtttgagctgcaccatctgagggacttcggcaatgaagcagatgaccagagcttcagc
tccgaggagcaaatcggctggctccaacttctcggtctcttcatgtcatttcttggtgtc
atgtgtagccgagcactgctgaacaagaaccgaggagaggagatcatgggagaatgtcca
ttgccagccatcaaggtgtcccttgactggctcaaactacgacctaccgtttttcaggac
ggcgccgtggacagacgacagtatgtttggccttggctggtgtccattctgaacagtttc
caaccaaaggaagatgatgtttcctgtgcatcaatgactccacttccagaggagtttgaa
ctgcaggggtttttggctctcaggccagcgctacggacccttgacttcactaaaggccac
cagggtgttgctgtggacaaggagggtctgccagtccgtgcccgtcatcagaggctcatc
agcctggggaaatgggtggcagacaaccagccagggctgattcagtacaaagtcagcgat
ggcctgctgctgttcatcaccgacatcgaggaattggccatcgaggagccccaggagaag
gatgcccctgtgctccaggagtcctccaacagtgagcagacccccaacgagggcaacatg
ggcctgaagtcagtcctgtccatgggcaagacccagaacagcgtgttggagatcggcgag
aggcccgtggtgaccttcaaggagaacatcaagccccgggagcagagcagggagcccagc
cgcaatcaccaccagaaggaggcagggaaggaacggagggacttcggcaaaggcaatgga
gtgccgggaaaaggagagcagaagagggatggcaagaggaagagtgaggtgaagaagaac
agccatgagaaagctgcagacgcagggaaacaggtgaaagcccagctggatatgaggaag
acgccagtgtctgaggccaggaagactccagtcactcagacccagactacctgctcctcc
cagttcatccccatgtaccacccgggagccttccctccactgcccagccgacaaggtttc
ccccctccagcctatgtgatccctcctcccgtggcgttctccatgaatcccggctttacc
ttctctacgggcatgtctgtccccgggccgttcctgcagtcggcctcccaccctcagcag
cccggtgcccagcagcaggtgcaggttcaggctgggaagccgtcgcacattccatacagc
cagcagaggccgtcagtgccgggggcgatgaaccaaggggccccccagggccagggccag
caacagccttcccagaccatgcagctccaggtccaggctcttgtccaacagcagcagtcg
cccaccaagcctgtgcagccagtccagctgggcaaaagcccacctcaccatccagggatg
cagcagtacatgcaggtagatcaggctggacagatgtggggccagcaccaggcccagcag
caccagacccagcccaccatgcagaagatgcaggccatgcagatgcctgtcaagcagccc
tactacatgggaagcccccaggaccccctcaagctctttgagcagcagcagtacgccatg
cagacggtgccccagcagaacagcatggacaagaagatgaagtacccggatgtgaaaatg
caggatttttactgggacccttcctaccgcgttggggataacagaccgatggtgggggag
aggatgagcaaacggctgccccccggggccttccacccagaccaggacaacacacccaga
gggcctccttttgaggacaagagctcccctcttctgcctccagacctgttaaaaagtata
tcagattttgaggaggaggaagagctggcctttactaagcctcatggtttctaccaggcc
ttgactggccctcttagtactgctccaggacgaaatatatttttgccaaatcagtcaaga
atggaaagtggctctgaggtgatgggccagtcgtcttctctcatgcccttatctggtttc
ccaattcaggagagttcctatcaaaacaacagcattttcagccaggcctatgggaagaac
atggctcccaaccccaagcccgacgctcccatgcttcaccaggaaccttctctctactcc
ctgtttgaaggaactccatggtccccgtcccttcccgccagctcagaccactctacacca
gcaagccagtccccccattcttccaacccaagcagtttaccctcttctccacccacgcac
aaccatggctccatccccttctctaacttcggccccataggaacacccgacaaccgagac
aggaggatggtcgaccgctggaaggtggaaaagacgcctgtgagtgggtttggtctggac
tacctgcccgctgcgtcgtcctcttcagaccaccgaacccctgagaacagctggcaccag
gggaacgcccccagcagctcctgggccgcccaggagttgcccatggaagactcctccact
gtgctcctggacagtctgaagtccatctggtctagctccatgatgcagccggggccttcg
gccctggagcagctcctcatgcagcagaagcagcagaggggccggggcaccatgaaccct
ccacactga
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