Salmo trutta (river trout): 115169802
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Entry
115169802 CDS
T08542
Name
(RefSeq) deubiquitinating protein VCIP135-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115169802
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115169802
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115169802
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C64
115169802
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
115169802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
115169802
NCBI-ProteinID:
XP_029581617
Ensembl:
ENSSTUG00000023000
UniProt:
A0A674A422
LinkDB
All DBs
Position
31:complement(24146274..24153632)
Genome browser
AA seq
1184 aa
AA seq
DB search
MSLLQGSKKKDKRILSGTCPDPKCQARLFFPAYGSISIECTECGQRHEQNNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEMFDCSLLGDRAFLIEHEHVSTVGYGKDRSGSLIYLHDTLEEIKKANSNKECIIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCKGKDGKFNKPICIAWSSSGRNHYIPLVGIKNTLLPKLPPRLLPKAWGVPQELIKKYIN
LEQDGSCVIAGDRSLQDKYVMRLVNAMEEIFMEKHGIHPSLVADVHQYVYRRTGMIGVQP
EEVTEAAKKSVMENRLHRCLICNALSELHVLPEWLAPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPEKDILIPDYKLSTLNTCNWCHGTSVRHIHGNGSVVYLDGDRTNTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEVEVTLNSNVYDVAMKLV
TKHFPGEFGSELLVQKVVNTILHHTAKKNPDEYNPVSIDGAHAQRLTDVVETQQAVDTQP
PTKIILTGQKSKTIHKEELTMSKAERSLQQSISEQALVTQKRRTDRLKQEQKGVQGHGRS
SSPSAAQEPSSSAPATPTKSSTSSKEKKIRVTTSDGRQAMLTLQAQTTFSELQRSIANEF
IVSPAQQCIRHGFPPKELLPPKDGEENEPVALQHGDRVTVEILRGPEDHKVSAPSASSSH
SNLHSLHSVKSDDPVTSSRMNTSRELQENIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQ
QGGVFFNIVKKDMGLMDGKHCTLPHLTGKTFVYNAAEECLELCVDAAGHFPVGPDVEDLV
KEALVQLRSEAASRSREGSPSHSLLRLGSGGVVRKKEQLQSVNAFQGKGHSLGSAPGGSP
PEHKPITRQHSSGVDLSASVSKGPDLSDISEDATKELVRMAPGFVTMKDSRHLDPSMIEE
QRKKLQEMVSSIQASMDRHLREQSNAGAGTGGPAERTSGAKMSASQSAPGVGDQEASSMD
VSTPGARGTPVKAGNKPDAGSEELEEMDSQDAEHTNALEPMDHS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgctacaaggctcaaagaaaaaggacaagcgtattttgtccggtacctgccca
gacccgaaatgccaggcgaggctattcttccctgcttacggctcgatcagcattgaatgc
actgaatgtggccaacgccacgaacagaataatcttttaaacgtggaagaagtaactgat
ccagatgttgtactgcacaatttgttaagaaatgccctactcggtgtcactggagcccca
aagaagggaaccgagctggtgaaagtgatggggctttccaactaccattgcaagctcctc
tctcctattctcacaaggtatggaatggataagcagacgggaaaagcgaaactgctgagg
gaaatgaatcaaggagagatgttcgactgctcacttctaggtgatcgggcgtttctaatc
gaacatgagcatgtatctacagttggctatggcaaggacagatccgggagcctgatatac
cttcacgacacattggaggagattaagaaagctaacagcaacaaagaatgcataattcct
gttcatgtggatggagatggacattgccttgttcatgctgtgtccagggccctggtaggc
agagaactgttctggcatgccttaagagagaatttgaaacagaatttcaagcaaaatctg
gatcgctacaaggcactctttcaggattttattgatgcagctgaatgggaggacatcatc
aacgaatgtgaccccctttttatcccaccggagggtgtgccactgggacttcgaaacatt
cacatatttggcttggctaatgtgctgcaccgccccataatcttgttagattcactaagt
ggaatgaggagctctggggattactctgcaacttttctccctgggcttgtaccggaagag
cagtgcaagggaaaagatgggaagttcaacaagcctatatgcatcgcctggagtagctct
gggcgtaaccactacatccctcttgtcggaataaaaaacaccctcctccccaagcttccg
ccgaggcttctccccaaagcttggggggtcccgcaggagctcatcaagaagtacattaac
ttggagcaagacgggagctgcgtcatcgcgggagacaggagtttacaagacaagtatgtg
atgagactggtcaatgccatggaggagatcttcatggagaagcatggcatccacccctcc
ctggtggcagacgtgcatcagtacgtttacagacggaccggtatgatcggcgtccaaccc
gaagaggtgacggaggctgccaagaaatcagtcatggaaaaccggctacatcgctgtctg
atctgcaatgcactctctgagctccatgttctacctgagtggctggctccaggtggtaag
ctctacaacctggctaaatccacccacgggcagctcagacccgacaagaactacagcttt
ccgttgaacaatgtggtctgctcttacgaccccgagaaagacatcctcattcctgactac
aaactgagcaccttgaacacctgcaactggtgccacggcacctcagtgcgccacatccat
ggcaacggctctgtggtgtacttggatggagacagaaccaacacccgctcccaggggggg
aagtgcggctgcggcttcaagcactactgggagggaaaggagtacgacaatctgccagag
gctttccccatcactctggagtggggtgggcgtgtcgtgagggagacagtgtactggttt
cagtatgaggttgaggtgaccctgaacagcaacgtctatgatgttgccatgaaactggtt
accaagcatttccctggggagtttgggagtgagctcctagtgcagaaagtggtgaacacc
attttgcatcacactgccaaaaagaacccagatgagtataacccagtctccattgacggt
gcgcatgctcagagactcacagatgtggtggaaacccagcaggctgttgacacacagcca
ccgactaagatcatactaactgggcagaaatcaaagaccattcataaagaggagctgacc
atgagtaaagcagagcggagccttcagcagagcatcagtgaacaggccctagtgacccag
aaaaggaggacagatcgactgaagcaggagcagaagggagtccagggacatgggcggtcg
tcctctccgagtgctgctcaggaaccttcctcgtccgccccagccacgcccaccaaatct
tccacttccagtaaggagaagaagatccgtgtcaccactagcgacgggcggcaggccatg
ctcactctacaggctcaaaccaccttctctgagctccagaggagcattgcgaacgagttc
attgtgtctccagcccagcaatgtattcgacatgggtttcctcccaaagaacttttgcct
cccaaggatggagaggagaatgagccggtggctctccaacatggggacagggtgactgtg
gagatcctgagaggtccagaggatcacaaggtttccgccccaagtgcttccagttcccat
tcaaacctgcattccctccactctgtgaagagtgatgatccagtgacttccagcagaatg
aatactagcagagagctgcaggagaacattgaccttgagatgtcctccctctgtctccta
gcaaccttaatgggagaagatgtctggtcatatgcaaaaaaactgcctcacttattccag
caaggtggagttttcttcaacattgtgaagaaagatatgggcctgatggatggcaagcac
tgcaccctcccacacttgactggaaagacatttgtgtacaacgcagcagaggagtgtctg
gagctgtgtgtggatgcggcgggacacttccccgtgggccctgacgtggaggaccttgtc
aaggaggccctggtgcagctccgctctgaggctgcctccaggagtcgggagggaagcccc
tctcacagcctgctgaggctcggaagtggaggtgtggtgcgcaagaaggagcagctccag
agtgtcaacgccttccagggtaagggccactccctgggcagtgccccaggtggctctccc
cctgaacacaagcccatcacccgccagcacagcagcggggtggacctgagcgccagcgtc
tcgaagggacccgacctctctgacatctcagaagatgcaaccaaggagctggtgcgcatg
gctcctggtttcgtcaccatgaaagacagccgacacctagaccctagtatgatcgaagaa
caaaggaaaaaactacaggagatggtctcatccatccaagcctccatggacaggcacctg
agggagcagagcaatgcaggggcaggcactgggggccctgcagagaggacaagtggggct
aagatgagtgcttcccaatctgccccaggggtaggtgaccaggaagcctcttctatggac
gtatctactcctggtgctcgtggcacaccagtgaaggcagggaataagcctgatgcaggg
tcagaggagctggaggaaatggatagccaggatgcagagcataccaacgccctggagccg
atggatcattcctga
DBGET
integrated database retrieval system
