Salmo trutta (river trout): 115169818
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Entry
115169818 CDS
T08542
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115169818
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115169818
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
115169818
NCBI-ProteinID:
XP_029581667
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All DBs
Position
31:complement(25028069..25043226)
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AA seq
698 aa
AA seq
DB search
MMTSWSVTKKNALVHLNELRPGLQYEIVSQTGPVHAPVFAVGVEVNGLRFEGRGPTKKKA
KMRAAELALKSFIQFPNAHQAHITMGNLNFINTTAPTDFTSDQADLVPDTLFKEFQPEAQ
EDQILNHRTGGKELQFEEPPAQGQLYRTVKRGHELLSSICNHGRLVRLTLDLMSSANQKR
QRIGSSIVGELRPVALLNELMPGLRYICLTERKKGRPIRSFVMAVRVDRRVFEGCGRSKR
LAKAEAAASALQDLFNISLGPERSISNTASWAKSAQLPQCFAEYIFHLVREKHSELADCC
CTTSQPHRRHKALAGIVMTRGFDLRRAQVVSLGTGTKCISGECVSDQGWAVNDCHAEVTT
RRAFLRFLYAQLELLCNRPGSLEQSIFVRDKESVLRLRDGILFHMYVSSSPCGDARLNCP
YEITATHQSGYRFVRKLRCHLRMKTEGGEGTLPVSILRANQKWDRGLPREPPVTMSCTDK
IARWNILGLQGSLLSHLVEPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNRL
LLGCLSSSEGRQPGKSPSFSVNWSAGDGELEVVDVSTGRKDSGTPSRLCKRSFFSRWERL
HHQLSSPGGVLDAEEAHFLISDSTRTLSARSVEGRVSPRSDATCRKTMEEAMKTYCGAKM
AAGAYQRARQTFVVSLQEAGLGIWNRKPPEQEHFQSRV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttcctggtctgtcacaaagaagaatgccctggtgcatttgaatgagctgaga
ccaggtctacagtatgagatagtgtctcagacagggccagttcacgcccctgtgttcgct
gtaggagtagaggtcaacggtctcaggttcgagggccgaggccccaccaagaagaaggct
aagatgagggcagcagagctggctcttaagtccttcatccagttccccaacgcccatcag
gctcacatcaccatgggaaacctcaacttcatcaacaccacagcaccaacagacttcacc
tcagatcaggccgatctcgtccccgacacgctcttcaaggagtttcagccagaagcacag
gaagaccaaatccttaatcacagaacagggggaaaggagttgcagtttgaggagccacca
gcacaaggacaactctacagaacagtgaaaaggggacatgagttgctctccagtatctgt
aaccatgggagactagtgcgcctgacccttgacctgatgtcctcagccaatcagaagagg
cagaggatcggttcctctatcgtcggggaactgaggcccgtggctctgctcaatgagtta
atgccaggcttgaggtacatctgcctgacagagagaaagaaaggcaggccgatcaggagc
tttgtgatggcagtacgggtggatagaagggtatttgagggctgtgggcgcagtaagagg
ctggctaaagccgaggcagcagcctcagcactacaggacctgtttaacatcagtctaggt
cctgagaggagcatcagcaatactgccagctgggccaagagcgcacagctacctcagtgc
tttgcagagtatatcttccacttggtgagagagaaacacagtgagctggctgactgttgc
tgcactacctcccagccgcacagacgtcacaaagcactggcaggcatcgtaatgaccaga
ggttttgatctgaggcgagcccaggtggtgtctttggggacagggaccaagtgtatcagt
ggagagtgtgtcagtgaccagggatgggctgttaatgactgccatgctgaggtcaccacc
aggagggctttcctccgcttcctctatgcccaactggagcttctctgcaaccggccaggc
agtttggagcagtcgatttttgtgcgagacaaagagtcagtattaagactgagagacggt
attctgttccatatgtatgtgagttcatcgccctgcggggacgcacgcctcaactgtccc
tacgagatcacagctacacaccagagcgggtacagatttgtgaggaagttgcgctgccat
ctgagaatgaagacggaaggcggtgagggtacacttcctgtcagcatactgagagccaat
cagaaatgggacagggggttgccgagggaacctcccgtcaccatgtcctgcacagataaa
attgccaggtggaatattctaggtctccagggctctctcctgtctcacctggtggagccg
gtgtacctccacagcctcacagtgggcagcctgtgccacacgggtcacctgggaaggacc
atggcacgacgcatggggcacatcgcccctctgccctcgtcctatagacgcaacaggcta
ctgctcggctgcctcagcagcagtgagggtcggcagccagggaagtcccccagcttcagt
gtgaactggagtgctggagacggagagctggaggtggtggatgtctccacaggcaggaaa
gactcagggacaccatccagactctgcaagagatccttcttcagtcgctgggagagacta
caccaccagctgagcagtccaggaggagtattggatgcagaggaggcccattttcttatt
tcagatagcacaaggactctctctgcacggtcggttgagggacgagtgtcacctaggagt
gacgccacctgtcggaagacaatggaggaggccatgaagacgtactgtggagctaagatg
gcagcaggggcctaccagagagccaggcagacgtttgtcgtctcgctgcaggaggcaggt
ctgggcatctggaacaggaaaccaccagaacaggagcatttccagagcagggtgtga
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