KEGG   Salmo trutta (river trout): 115169831
Entry
115169831         CDS       T08542                                 
Name
(RefSeq) integrin beta-1
  KO
K05719  integrin beta 1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03271  Virion - Rotavirus
stru04145  Phagocytosis
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04514  Cell adhesion molecule (CAM) interaction
stru04517  IgSF CAM signaling
stru04518  Integrin signaling
stru04530  Tight junction
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
stru05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    115169831
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115169831
   04514 Cell adhesion molecule (CAM) interaction
    115169831
   04517 IgSF CAM signaling
    115169831
   04518 Integrin signaling
    115169831
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    115169831
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115169831
   04530 Tight junction
    115169831
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115169831
   04810 Regulation of actin cytoskeleton
    115169831
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    115169831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115169831
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115169831
   04515 Cell adhesion molecules [BR:stru04515]
    115169831
   04090 CD molecules [BR:stru04090]
    115169831
Membrane trafficking [BR:stru04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115169831
Exosome [BR:stru04147]
 Exosomal proteins
  Proteins found in most exosomes
   115169831
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin beta subunits
   115169831
CD molecules [BR:stru04090]
 Proteins
  115169831
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 115169831
NCBI-ProteinID: XP_029581699
LinkDB
Position
31:26039816..26062462
AA seq 802 aa
MDLRLLSIATLLGILCFCSAQQEGSDCIKANAQSCGECIQVAEKCGWCTDTDFLKQGESK
SARCDELQSLITKGCTKAKIENPRGSTSINKNKPVTNRKKDMAEKLKADQITQIQPQKIT
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMKEVTSDF
HIGFGSFVEKTVMPYISTTPARLLNPCTSTNNDTCTSPFSYKNVLKLTEDGEEFNSLVSK
QQISGNLDSPEGGFDAIMQVAVCGEAIGWRNVTSLLVFSTDAGFHFAGDGKLGGIVLPND
GKCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVG
TLSSNSSNVIKLIIDSYNSLSSEVILENGKLPEGVSITYKSICKNGWVGTGENGRKCSNI
SIGDEVSFEIAIKSEKCPPEGNSETITIKPLGFTENVEIVLNFICECECSKDGKPLSEMC
HNGNGTFECGACRCNEGRIGRLCECSTDEVRTDDLDANCRKDNGTDICSNNGDCVCGTCE
CKKRENPEERYSRKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTS
TCLAANKQICNGRGTCECGVCKCTNPKFQGPTCEICPTCPGVCAEHKDCVQCQAFETGEK
KDTCKRDCSYFNLIRVKDRDKLPQPADQSYPLSHCKERDANDCWFYYTYAVRNHTEREVY
VVDTLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD
TGVNPIYKSAVTTVFNPKYEGK
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggatctgaggctactttcaatagcaacattattaggaatcctgtgtttctgcagtgca
cagcaagagggcagtgattgcatcaaggccaatgcacaatcatgtggggaatgcatccag
gtggcagagaaatgtggatggtgtacagacactgacttcctgaagcagggagagtctaag
tcagcacgctgtgatgagctacagtccctgatcacgaagggctgcactaaggccaagatc
gagaacccccggggcagcacctccatcaacaagaacaagcctgtcaccaaccgcaagaag
gacatggcagagaagctgaaggctgaccagatcactcagatccagcctcagaaaatcacc
ctcaacctccgatccggtgaggcccagacctttaagttgaagttcaagagggcagaggac
taccccatcgacctctactacttgatggatctctccttctcgatgaaagacgatttggag
aacgtcaagaatctggggactgacctgatgcgtgagatgaaggaggtcacctcagacttc
catatcggtttcggctcctttgtggagaagacagtgatgccatacatcagcactacccca
gccagactgctgaacccctgcaccagcaccaacaacgacacctgcacgagccccttcagc
tataagaacgtgctgaagctgactgaggacggggaggagttcaacagcctggtcagtaag
cagcagatctctggaaacctggactcccctgagggaggattcgatgccatcatgcaggtg
gccgtctgtggggaggccattggctggaggaacgtcactagtctgctggtgttctccact
gacgctggcttccactttgctggagacggcaagctgggcggcatcgttctgcccaacgat
gggaagtgtcatctggagaacaacatgtacaccatgagccattactacgactatccctcc
attgcccatttggtccagaaactgagcgacaacaacattcagaccatttttgctgttact
gaggaattccagcctgtttacaaggagctgaagaacctcatccccaagtctgcagtagga
actctgtcctccaactccagcaacgtcatcaagctcattatcgattcttacaactctctg
tcatctgaagtcattctggaaaacggcaagctgcctgaaggtgtatccataacatacaag
tccatctgcaagaacggttgggttggaaccggagagaatggaagaaaatgctctaacatc
tccattggagatgaggtgtcctttgagattgccatcaagtccgagaagtgtccgcctgaa
ggcaattccgagaccattacaatcaagcccctgggttttactgagaatgtggagatcgtc
ctcaacttcatctgcgaatgtgaatgttccaaagatggaaaacctctcagcgagatgtgc
cacaatggcaatgggacctttgagtgtggagcctgcaggtgcaacgagggccgtattggc
agactgtgtgagtgcagtacagacgaggtgaggacggacgacctggacgctaactgccgg
aaagacaacggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgag
tgtaaaaagagagagaacccagaagaacgttacagtaggaagttctgcgagtgtgacaac
ttcaactgtgaccgctccaacaacaaactctgtggaggacatggacgttgtgagtgcagg
gtgtgtatctgtgatgccaactacacgggcagcgcctgcgactgttccctggacacctcc
acctgcctagcagccaacaagcagatttgtaatggccggggcacctgcgagtgtggtgtc
tgcaagtgcaccaaccccaagttccagggccccacctgtgagatctgccccacctgcccc
ggcgtctgtgctgagcacaaagactgtgttcagtgccaggcctttgagacaggagagaag
aaggacacgtgtaagagggactgcagctacttcaacctgatcagagtgaaggaccgggac
aagctgccccagccagccgaccagtcctaccccctatcccactgtaaggagagggacgcc
aacgactgctggttctactacacctacgccgtcaggaaccacacagagagggaggtctac
gtggtcgacactctggagtgtccagcaggtcctgacatcatccccatcgtggctggcgtg
gtggcgggcatcgtgctgatcggcctggccctcctcctcatctggaagctgctcatgatc
atccacgaccgcagggagtttgccaagttcgagaaagagaaaatgaacgcgaagtgggac
acgggagtgaatcccatctacaagagtgccgtaacaactgttttcaatccaaaatacgag
ggcaaatga

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