Salmo trutta (river trout): 115169831
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Entry
115169831 CDS
T08542
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03271
Virion - Rotavirus
stru04145
Phagocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
stru04518
Integrin signaling
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
stru05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
115169831
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115169831
04514 Cell adhesion molecule (CAM) interaction
115169831
04517 IgSF CAM signaling
115169831
04518 Integrin signaling
115169831
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115169831
09144 Cellular community - eukaryotes
04510 Focal adhesion
115169831
04530 Tight junction
115169831
09142 Cell motility
04820 Cytoskeleton in muscle cells
115169831
04810 Regulation of actin cytoskeleton
115169831
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115169831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115169831
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115169831
04515 Cell adhesion molecules [BR:
stru04515
]
115169831
04090 CD molecules [BR:
stru04090
]
115169831
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115169831
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115169831
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115169831
CD molecules [BR:
stru04090
]
Proteins
115169831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115169831
NCBI-ProteinID:
XP_029581699
LinkDB
All DBs
Position
31:26039816..26062462
Genome browser
AA seq
802 aa
AA seq
DB search
MDLRLLSIATLLGILCFCSAQQEGSDCIKANAQSCGECIQVAEKCGWCTDTDFLKQGESK
SARCDELQSLITKGCTKAKIENPRGSTSINKNKPVTNRKKDMAEKLKADQITQIQPQKIT
LNLRSGEAQTFKLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMREMKEVTSDF
HIGFGSFVEKTVMPYISTTPARLLNPCTSTNNDTCTSPFSYKNVLKLTEDGEEFNSLVSK
QQISGNLDSPEGGFDAIMQVAVCGEAIGWRNVTSLLVFSTDAGFHFAGDGKLGGIVLPND
GKCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVG
TLSSNSSNVIKLIIDSYNSLSSEVILENGKLPEGVSITYKSICKNGWVGTGENGRKCSNI
SIGDEVSFEIAIKSEKCPPEGNSETITIKPLGFTENVEIVLNFICECECSKDGKPLSEMC
HNGNGTFECGACRCNEGRIGRLCECSTDEVRTDDLDANCRKDNGTDICSNNGDCVCGTCE
CKKRENPEERYSRKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTS
TCLAANKQICNGRGTCECGVCKCTNPKFQGPTCEICPTCPGVCAEHKDCVQCQAFETGEK
KDTCKRDCSYFNLIRVKDRDKLPQPADQSYPLSHCKERDANDCWFYYTYAVRNHTEREVY
VVDTLECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWD
TGVNPIYKSAVTTVFNPKYEGK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaggctactttcaatagcaacattattaggaatcctgtgtttctgcagtgca
cagcaagagggcagtgattgcatcaaggccaatgcacaatcatgtggggaatgcatccag
gtggcagagaaatgtggatggtgtacagacactgacttcctgaagcagggagagtctaag
tcagcacgctgtgatgagctacagtccctgatcacgaagggctgcactaaggccaagatc
gagaacccccggggcagcacctccatcaacaagaacaagcctgtcaccaaccgcaagaag
gacatggcagagaagctgaaggctgaccagatcactcagatccagcctcagaaaatcacc
ctcaacctccgatccggtgaggcccagacctttaagttgaagttcaagagggcagaggac
taccccatcgacctctactacttgatggatctctccttctcgatgaaagacgatttggag
aacgtcaagaatctggggactgacctgatgcgtgagatgaaggaggtcacctcagacttc
catatcggtttcggctcctttgtggagaagacagtgatgccatacatcagcactacccca
gccagactgctgaacccctgcaccagcaccaacaacgacacctgcacgagccccttcagc
tataagaacgtgctgaagctgactgaggacggggaggagttcaacagcctggtcagtaag
cagcagatctctggaaacctggactcccctgagggaggattcgatgccatcatgcaggtg
gccgtctgtggggaggccattggctggaggaacgtcactagtctgctggtgttctccact
gacgctggcttccactttgctggagacggcaagctgggcggcatcgttctgcccaacgat
gggaagtgtcatctggagaacaacatgtacaccatgagccattactacgactatccctcc
attgcccatttggtccagaaactgagcgacaacaacattcagaccatttttgctgttact
gaggaattccagcctgtttacaaggagctgaagaacctcatccccaagtctgcagtagga
actctgtcctccaactccagcaacgtcatcaagctcattatcgattcttacaactctctg
tcatctgaagtcattctggaaaacggcaagctgcctgaaggtgtatccataacatacaag
tccatctgcaagaacggttgggttggaaccggagagaatggaagaaaatgctctaacatc
tccattggagatgaggtgtcctttgagattgccatcaagtccgagaagtgtccgcctgaa
ggcaattccgagaccattacaatcaagcccctgggttttactgagaatgtggagatcgtc
ctcaacttcatctgcgaatgtgaatgttccaaagatggaaaacctctcagcgagatgtgc
cacaatggcaatgggacctttgagtgtggagcctgcaggtgcaacgagggccgtattggc
agactgtgtgagtgcagtacagacgaggtgaggacggacgacctggacgctaactgccgg
aaagacaacggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgag
tgtaaaaagagagagaacccagaagaacgttacagtaggaagttctgcgagtgtgacaac
ttcaactgtgaccgctccaacaacaaactctgtggaggacatggacgttgtgagtgcagg
gtgtgtatctgtgatgccaactacacgggcagcgcctgcgactgttccctggacacctcc
acctgcctagcagccaacaagcagatttgtaatggccggggcacctgcgagtgtggtgtc
tgcaagtgcaccaaccccaagttccagggccccacctgtgagatctgccccacctgcccc
ggcgtctgtgctgagcacaaagactgtgttcagtgccaggcctttgagacaggagagaag
aaggacacgtgtaagagggactgcagctacttcaacctgatcagagtgaaggaccgggac
aagctgccccagccagccgaccagtcctaccccctatcccactgtaaggagagggacgcc
aacgactgctggttctactacacctacgccgtcaggaaccacacagagagggaggtctac
gtggtcgacactctggagtgtccagcaggtcctgacatcatccccatcgtggctggcgtg
gtggcgggcatcgtgctgatcggcctggccctcctcctcatctggaagctgctcatgatc
atccacgaccgcagggagtttgccaagttcgagaaagagaaaatgaacgcgaagtgggac
acgggagtgaatcccatctacaagagtgccgtaacaactgttttcaatccaaaatacgag
ggcaaatga
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integrated database retrieval system