Salmo trutta (river trout): 115169833
Help
Entry
115169833 CDS
T08542
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00061
Fatty acid biosynthesis
stru00071
Fatty acid degradation
stru01100
Metabolic pathways
stru01212
Fatty acid metabolism
stru03320
PPAR signaling pathway
stru04146
Peroxisome
stru04216
Ferroptosis
stru04920
Adipocytokine signaling pathway
Module
stru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115169833
00071 Fatty acid degradation
115169833
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115169833
09143 Cell growth and death
04216 Ferroptosis
115169833
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115169833
03320 PPAR signaling pathway
115169833
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stru01004
]
115169833
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115169833
Enzymes [BR:
stru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115169833
Lipid biosynthesis proteins [BR:
stru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115169833
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of breast milk
115169833
Exosomal proteins of breast cancer cells
115169833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115169833
NCBI-ProteinID:
XP_029581702
Ensembl:
ENSSTUG00000035690
LinkDB
All DBs
Position
31:complement(26135661..26154175)
Genome browser
AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVCSFITFLPWYFLSGAGTNLDRARRVKARSVSGRPAGPYR
ATNQVGGIHQKLVWSLHLGVDTLDKVMVHGATRFPERDCLGTREVLNEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIITSKDLLHSRLMAILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNLVAVQELGGRPDNMAVARRQPLPSDIAVIMYTSGSTGIPKGVMISHSNII
AGITGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCRIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQMTKGYR
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLVCSEITLKNWEEGGYYSTDKPNPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGELHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLTVLAEQRGLRGSWEEICNNPDMERDVLRIITEA
ALSAKLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQDDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaagaggacatgaacccgctgctgctgcaagtcttccgctcagtggtctgg
gtctgctctttcattaccttcctgccatggtacttcctctcgggtgccggcaccaaccta
gaccgggcacggcgggtcaaggcgcggtcggtgagtgggcgtccagcgggcccttaccgg
gcaaccaaccaggtgggcggtatccatcagaagctggtgtggtccttgcacctgggggtg
gacaccctggacaaggtgatggtgcatggggcgaccaggttcccagagagggactgcctg
ggcaccagagaggtgctgaacgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctaggggagtatcagtggatgtcgtacgaggagacctaccaggcagcagtg
tgttttggcagtggtctggccgcgctgggccagaggcctcagtgtaacatcgccatcttc
tgtgagaccagggctgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccatcgcccacggtctcaacgaaaca
gagatcacccacatcatcaccagcaaagacctgctacacagccgtctcatggccatcctg
ttagaggttcctcggctgcagcacatcatcgtggtggacagtaagccaaccagctggcct
ggcttcccccgcggcatcatggtccacaacttggtcgccgtgcaggagctgggcggtaga
cctgacaacatggcggtggcacgccggcagcccctgccctctgacatcgctgtcatcatg
tacaccagtggctccaccggcattcccaagggtgtgatgatctcccatagcaacatcatc
gcgggcatcacgggcatggcagagcgcatcccagacctggatgagacagacacctacatt
gggtacctaccgctggctcatgttctggagctcagtgcagagatggtgtgtatctctcac
ggctgccgcatcggatactcctccccacagacgctagcagaccagtcgacaaagattaag
aagggcagtaaaggagacaccagtgttctgaagcctacactcatggctgctgtaccggaa
atcatggatcgcatctataagaatgtgatgaccaaggtggaggagatgagcagtgtgcag
agaaccctgtttgtgttggcctacaactataagatggaacagatgaccaagggctacagg
accccgctctgtgacagtctggtgtttaggaaggtgcgctccttgttaggaggtcacatg
cgggtgctgttgtcgggcggagcgcccctttctgccgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggagctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggagctcctctggtctgctctgag
atcaccctcaagaactgggaagagggcggttactacagcacagacaagcccaacccaaga
ggtgaaattgtgatcggcgggcccaatgtgaccatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaacggccagcgctggttctgtacgggagacatc
ggggagctccaccctgacggctgcctcaagatcatcgaccgtaagaaggacctggttaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgtgcttacgcaaacagtgaccagtcatatgtgattggctttgtg
gtgcccaatcaaaagcagctgacagtgctggcggagcagagagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggaaagagacgtcctccgcatcatcaccgaggcc
gccctgtcagccaaacttgagcgctttgagatccctaagaagatccgtcttagtgcagag
ccctggaccccagagactggcctggttacagacgcattcaagctcaaacgcaaggagctc
aaatcacattaccaggatgacatcgaaaggatgtatggtggcaagtaa
DBGET
integrated database retrieval system
