Salmo trutta (river trout): 115169855
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Entry
115169855 CDS
T08542
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115169855
03012 Translation factors [BR:
stru03012
]
115169855
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115169855
mRNA cycle factors
Stress granule specific factors
115169855
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-4
115169855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
115169855
NCBI-ProteinID:
XP_029581750
Ensembl:
ENSSTUG00000039845
LinkDB
All DBs
Position
31:complement(27798184..27856514)
Genome browser
AA seq
1787 aa
AA seq
DB search
MNKPPQPITGPTSVPHPSPSPGLTQLCFSASPLSQAVYASGQPTSLVFTTQTPQQMNSAP
QPRQFATGPRALHQQGGYRALQPYYANRPTMATSVPRVQTSSGPRPVGPTHIYQPGSQMM
MIPGQQLSFAGSPQGYFIPPGQYRAPYMPPSPQYPVTSGTAGFYPGTSPAEYPTYEPSLA
ARERRGGGRENGRLSLHGAPLTSQRYPAGAYYPAQPQYSHTPPVQTAPVMISPAQPQQQA
LPPQPPPSQPPAPKRERVTIRIRDPNQGGRDITEEIMSGGRATSTPTPPSQSSTTEEEGP
AQTNGEFTNPVTIVTRTDENAEPAVCTVTAAETLPPVLSTPEPATTAVPLEAKQETDGQV
APLTEQVVSESDAPVAGMRPEVPIPQREDQAPASSPLTASTSPPPAEVQIPPPAITMAQA
SHTVGAGVTPEGPSTQVEPLAAPASVEKPLAQVAEEVEEKVEKVKKEPAITINPEAVVAV
VVIKEDIEPAPQPVTPIAMATGDYFALSLKLVAAVEAATKTERGVLPPAPKQKAMTEPVS
APAHAATPSVPEAEPAVAQKKVEQLPLSNGLPQEDPDEVDAPVAALERIATEITEPAAPP
PQETANPAPAAIEEEEEEEVEEEQKEEDASPVPSSSSPSEDTSMQAAVSVPKKKRNMKEL
NKKEAIGDMLDAFKEEEAVAPATEPSSSPAEPSPVAPTSLPPADAPDETWEEKEDKQNAD
TPPLTPGDLKYQYKGEQWKPIDPEEKKRYDREFLLGCQFISASMNKPEGLPLITDVVLDK
ANKTPMRPAELGRNMNAGPDFTPAFMGNLGRQSSGGGGGGGPRGPGRDHMGPPGPRRSQQ
GQRKEPRKIITISSSLGGEVELNKAEKAWKPTVKKAVTRGRGAAPEDEESDDPEQAKTQE
LFKRVRSILNKLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMC
RCLMGLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDQDDDVIFEAKQKEMEAAKEEEKAGL
KATLEEAKDKARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLS
TIGKDLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVIDLRRSGWVPRRGEQGPK
TIDQIHKDAEQEEQMQQIKVQQQLMSRNDGGGRGGGGGGRDGRGGDRGGRDQGGRGGQHG
GQQVGRGSQPQDEGWNTVPISTKNRPIDTSRLSKITKPGALDFSNQLLAPQLGGKGMWGS
WGKGSSGGTTGAKPATGADPAAETGRPTTGNRFSALQQSAPPASSSDADRRVPQRSSSSR
DRDRFDRFERHDSSREERSGSRDARPTITKRSFSRETEERRGDCCTPTEPPVRRVASMTD
DRDRGGSRSRGGSRSRDRAPSKEVVVTRETAPTPPPDTPTRLAMTEEELEKKSSAIIEEY
LHLNDMKEALQCVVELNSAPLLFVFVRNGLENTLERSAIARERMGLLLHQLIKAGIMPTT
EYYKGLQEILEMAEDMAIDIPHIWQYLSELINPMLHEGGIPMGQLFREISKPLIPLRKAG
VLLVHILNLLCKGMTHKKVGGMWTEAGLNWRDFLPEDEDVNKFVTEQKMEFTLGEKSDGT
NQKKPMSGEELSKQLDRLIQDKANNQRIRDWVEANLDEQQTSANQFVRTLMTSICQSAVI
CENPYKVDVEQITQRAKLLQRYLSDEKKELQALYALQALMVHMEQPANLLRMFFDTLYDE
DVIKEEAFYRWESSKDPAEQTGKGVALKSVTAFFTWLRDAEEESDKD
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccaccgcagcctataacgggacccacctctgtcccacacccctccccctcc
cctggcctgacacagttgtgtttctctgcctcccctctctcccaggctgtctatgcctct
ggacaacccacttctctcgtcttcaccacccaaacacctcaacaaatgaattctgcaccg
cagccacgacagtttgccaccgggccccgtgctttacaccaacagggtggatacagggca
ctgcagccttactatgccaacaggcccaccatggccaccagtgtcccccgggtccagacc
agcagcgggcctcgtccggttggtcccacccacatctaccagcccggctcccagatgatg
atgatccctgggcagcagctgtcctttgctggctcccctcagggctacttcatcccccct
ggacagtaccgggctccctacatgccaccaagtccacagtaccctgtgacaagtgggaca
gcaggcttctacccaggcaccagcccggctgaataccccacctatgagccctctctggct
gcgagggagaggagagggggcgggcgagagaacgggcgtctctctctccacggtgctcct
ctcacctcccagcgctaccccgcaggtgcctactacccggcccagccccagtacagccac
acaccccctgtccagaccgcgcccgtcatgataagccccgcccagccccagcagcaggcc
ttgccccctcagccgccgccgagccaaccaccggcacccaagagggagcgcgtaacgatc
agaatacgagaccccaaccaggggggccgtgatattacagaggagatcatgtccggggga
agggccacctccacccccacccccccttcacagtcgtccaccacagaggaagaaggtcct
gcccagaccaacggagaatttactaaccccgtcaccatcgtgacgagaacagatgaaaac
gcggaacccgcggtttgcacagtgacggccgccgaaaccctgcctccagtgttgtcaact
ccagagcctgccaccacagctgtcccactggaggccaaacaggaaaccgatggccaggtt
gccccgcttaccgaacaggtcgtcagcgaatcagatgcccccgtggcagggatgaggccc
gaggtgcccatcccacaaagggaagaccaggcccctgcctcctcccccctgacagcttct
acctcccctccccctgcagaggtacagattccaccccctgccatcaccatggctcaggcc
agccacacagtgggcgctggtgtgacccccgaaggtccttccacacaggtagagcctctg
gctgcaccagcatctgtggagaagcctcttgcccaggtagcggaggaagtagaggagaag
gtagaaaaggtcaagaaggagccggcaattaccatcaatccagaggcagtagtggctgtt
gtggtcattaaagaagacattgaacccgctccacaacctgtgacccccatcgccatggca
acgggcgactatttcgccctgtccttgaagttggtggcggctgtggaagcggccactaaa
actgagagaggggtgttgccgccagcgcctaaacagaaagccatgaccgagcccgtttct
gcccccgctcatgccgccactccctctgtcccggaggcggagcctgccgtggcccaaaag
aaggtggagcagctgcccctgtccaacggcctcccccaggaggaccccgacgaggtagac
gcccccgtggctgcactagagcgcattgcaacggaaatcacagagcctgccgctccccca
cctcaggaaacggctaaccctgcgcctgctgccatagaggaggaggaggaagaggaggtg
gaggaggagcagaaagaggaggatgcatccccagtaccctcgtccagcagcccttcagag
gacacgtctatgcaagctgctgtgtctgtgccaaagaagaagaggaacatgaaggaactg
aacaagaaggaagccatcggagacatgctggatgccttcaaagaggaggaggcggtggca
cctgccaccgagccctcgtcttcaccggcagagcccagccctgtggccccgacctccttg
ccacccgccgacgcgccagacgagacgtgggaagagaaggaggacaagcagaacgccgac
acacccccgctcacaccgggcgacctcaagtaccagtacaaaggagagcaatggaagcct
atcgacccagaggagaagaagaggtacgacagggagttcctgctgggttgccagttcatt
agtgccagcatgaacaagcctgagggcctgcctctcatcaccgacgttgtgctcgataag
gcgaataagacgcccatgcgcccagcggagctgggtcgcaacatgaacgccgggccagac
ttcacccccgccttcatgggtaacctgggtagacagtcctctggaggaggtgggggaggg
ggaccacggggccctggaagggaccacatgggaccccccggaccacggcgctcccagcag
ggccagcgcaaggagccccgcaagatcatcacaatctcctcatcgctaggtggcgaagtg
gagctcaacaaggcggagaaggcctggaagcccacagtgaagaaggctgtgacccggggc
cgaggcgccgcccccgaggatgaggagagcgacgaccccgagcaggccaagacccaggag
ctgttcaagagggtccgctccatcctcaacaagctgacccctcagatgttccagcagctg
atgaagcaggtcacagagctgaccatcgacacggaggagcggctgaagggagtgatcgac
ctgatctttgagaaggccatctctgagcccaacttctctgtggcctacgccaacatgtgc
cgctgccttatggggttgaaagtgcccaccacagacaagccgggagtgactgtaaacttc
cgcaagctgctgctcaaccgctgtcagaaagagtttgagaaggaccaggatgatgatgtg
atctttgaggccaaacagaaggagatggaggctgccaaagaggaggagaaagctggtctg
aaggcgacgctggaggaggccaaagacaaggcgcggcggcggtcgctgggcaacatcaag
ttcatcggcgagctgttcaagctgaagatgctgacggaggccatcatgcacgactgcatc
gtcaagctgctgaagaaccatgacgaggagtcgctagagtgcctctgtagactgctgtcc
accatcggcaaggacctggactttgagaaagccaagccccgtatggaccagtactttgcc
cagatggacaagatcatcaaggagaagaagacctcgtctaggatccgcttcatgctgcag
gacgtcatcgacctcagacggagtggctgggtgccccggcggggggagcagggccctaag
accattgaccagatccacaaggatgctgagcaggaggaacaaatgcagcagatcaaggtt
cagcaacagctcatgtcaaggaatgacggaggaggacgaggaggtggtggagggggaaga
gacgggagggggggagacagaggaggaagggatcaggggggccgcggtggccagcatggg
ggccagcaggtgggaaggggcagccagccccaggacgagggctggaacacagtgcccatc
tccaccaagaacagacccatcgataccagccggctcagtaagatcaccaagcctggtgct
ctggacttcagcaaccagctccttgctccccagctcgggggtaagggcatgtggggcagc
tggggcaagggcagcagtggaggcaccacaggagccaagcctgccaccggagctgaccca
gcagcggagactggccgtccgaccaccggcaaccgtttctctgccctgcagcagtctgct
ccaccagcatcctcctcagacgctgaccgcagggtaccccagaggtccagctccagtcgt
gaccgggacaggttcgaccgcttcgagcggcacgacagtagtcgtgaggagcgtagcggc
agtcgcgacgcccgccccactatcactaagcgcagcttcagccgtgagacagaggagcgt
aggggcgattgttgcacccctacggaaccccccgtccggcgcgtagccagcatgactgac
gacagagaccggggaggcagccgtagccggggaggcagccgtagccgggacagggctccc
agcaaagaggttgttgtgacgcgtgagacagcccccacccctccccccgatactccgacc
agactggccatgaccgaggaggagctggagaagaagtccagcgccatcatcgaggagtac
ctccacctcaacgacatgaaggaggcactgcagtgtgtagtggagctgaacagcgccccg
ctgctctttgtgtttgtgcggaacggtttggagaacactctggagcgcagcgccatcgcc
agagaacgcatgggcctgctgctgcaccagctcatcaaggctggcatcatgcccacaaca
gagtactacaaagggctccaagagatcctggagatggctgaggacatggccatagacatc
ccccacatctggcaatacctgtctgagctcatcaaccccatgctccacgagggaggcatc
cccatgggacagctcttcagagagatctccaagcccctgattcccctgcgtaaggccggt
gtgctgctggtgcacatcctcaacttactctgcaaaggaatgacccataagaaggtgggc
ggtatgtggacggaggcggggctcaactggagagacttcctgccagaggacgaggatgtc
aacaagtttgtgactgaacagaaaatggagtttaccctgggggagaagtcagacgggacc
aatcagaagaagcccatgagtggggaggagcttagcaaacagctggacagactgatccag
gacaaggctaacaaccagcgcatcagagactgggtcgaggccaacctggacgaacagcag
acgtccgccaaccagtttgttcgcactctgatgacatccatttgccagtcagccgttata
tgtgagaacccatacaaggtggacgtggagcagattacccagagggccaagctgctgcag
cggtacctgagtgacgagaagaaggaactgcaggccctctatgccctccaggccctcatg
gtacacatggagcaaccggccaatctgctgcggatgttctttgacacgctttacgacgag
gacgtgatcaaagaggaggccttttacaggtgggagtccagcaaagacccagccgagcag
actggaaagggtgtggccctcaagtcggtcaccgccttcttcacctggctccgtgatgcc
gaagaagagtccgacaaagactaa
DBGET
integrated database retrieval system
