Salmo trutta (river trout): 115169882
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Entry
115169882 CDS
T08542
Name
(RefSeq) histone deacetylase complex subunit SAP130-like isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115169882
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115169882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
115169882
NCBI-ProteinID:
XP_029581811
Ensembl:
ENSSTUG00000047634
LinkDB
All DBs
Position
31:complement(28965403..28983857)
Genome browser
AA seq
1033 aa
AA seq
DB search
MSSQQYSRPGIPPGMGKKMIPGGNTAMVASSQPNTTGGTDDSSRDPHPDHSPYDRPSGGG
GAPGFRDDKQETVVVRPYPQVHGPPQGHHPTLPQHLPLQQGMPVTVSAPPPHIPRGLPLA
FTEGPIKVQSSLKSPIPSRVIAPAPANIQGHISLPPKVPSHLTVTMESTVPPTPGIPVAT
ISGQQAWRFQGNPSNLHHHVQIIRSNGPPLQLGSTGVPQHTFTSHLPRGAAAAAVMSSSK
GPTVLRPVTGPGSGTGPPTVQHIIHQPIQSRPIVTTSTAVLPTVVAPVTATRPQSPVVSS
ATHSAEMVHGRPGLTIHPPPATLSIQRPSQSRETPTRITLPSHPAIGGQKPQLYNTMAQK
PIFSNVTPVAAATVAPILATNTAPSPSTTGSGPHPNSNIVTMAMPSHSSHATAVTTSNIP
VAKVVPQPIAHTSPRIQPEYPGERGNLIPISGPRSSPNPITMEARSDSRQSVPVQFQYFL
PTYPSSSYPLTHTYTPITSSVSTIRQYPVTPQAPSGTAMQTQTSVGVASAVHLNPMQLMT
VDRIAQINTQNIQPAAMATQGIKSTNISTQGLHTATGQITAQNIQPVPINQQQPVIENKT
SVVLADGSTLVANPIGQPFGSTQSSTCIGQTHPQNTGPGAPTLLSSPRPSILRKKPANEG
SAVRKNLIPEATSPRIDGGIRPASGMKHKADLHVSLAPPLTSSSMEALPSHQINEQQPSQ
PIQTLLSVSAPPHSQPGPAMSAITPPISSMANVVVPPTQAAASSTAACGISSTLPEIKIK
QEVEPMDTSKAGPPMPHCGAPILSMMPGGDVILGASPRKKPRKQQHVISTEESEMMETNS
TDEEKVLARPHSMRPEKRKSPPKEYIDEEGVRYVPTRARPPVTLLRHYRNPWKAAYHHFQ
RYSDIRVKEEKKGTLQDVANQKGVVCRAQGWKMHLCAAQLMQLTNLEHDVYSRLTTLQEG
LIPKKKAGSDDDMHRINELIQGNMQRCKLVMDQITEARDAMMKVLDHKEKVMKLINKNGG
AKKVNKLKRKDKA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcaacaatattcacgaccgggaataccccctggtatggggaaaaaaatgatt
cctggaggaaacactgcaatggtggctagtagtcaaccaaacacaacaggtgggacagac
gatagcagccgtgaccctcacccagaccacagtccttatgaccgccccagcggtggtggt
ggagcaccaggctttagagatgacaagcaggagacagtggtggtcaggccttacccccag
gtccacggccccccccagggtcaccacccaacactacctcagcacctgcccctccagcag
ggcatgcctgtcacagtgtcagcccctccaccgcacattccccggggcctgcctctggcc
ttcactgaaggacctataaaggtgcagtcatctctgaagtcgcccatacccagtcgagtg
attgccccagcaccagccaacatccagggccacatctccctgccacccaaggtgccaagc
cacctcactgtaaccatggagagcactgtgcctccgacccccggcatccctgtagcaact
atcagtggccaacaggcgtggcgtttccagggcaaccccagtaacctgcaccatcacgtg
cagatcattcgcagcaatggcccgcccctgcagctcggctccactggcgttccccagcac
acctttacctcccatctaccacgaggagctgctgcagcggctgtgatgtccagttccaaa
ggacccaccgtactgagacctgttacaggccctggtagtggtactggcccacctactgtc
cagcacatcatccaccagcctatccagtcccggccaatagtaacaacgtccacggctgtg
ttgcccacggtggttgccccggtaacggccaccaggcctcagtccccggtggttagctca
gccacgcactccgcagagatggttcatgggcgtccagggctgaccattcacccccctcca
gccactctgagcatccagcgtccttcccaatctcgggagacccccacacgcatcaccctg
ccctctcaccctgccatcgggggtcagaaaccccagctgtacaacaccatggcacagaag
cccatattcagcaatgttactcctgtcgctgcagcaactgttgcccccatattagccacc
aatactgctccatcgcctagcacgacaggctcaggaccccaccccaacagtaacattgtc
accatggcgatgccctctcattcctcccacgccacagcagtcaccacgtccaacatcccc
gtggctaaagtggttccccagccaattgcccatacctcgcccaggatccaaccggagtac
cctggagagaggggcaacttgatccccatctcaggcccccgctcctcccccaaccccatc
accatggaggcccgcagtgacagcaggcaatcggtgccagtgcagtttcagtacttcctg
cctacctacccttcttcgtcgtaccctctgacacacacctacacccccatcaccagctct
gtttcaaccatccgacagtacccagtaacccctcaggcccccagcggcacggccatgcag
acccagaccagtgtgggcgtagcgtcggcggtgcacctcaaccccatgcagctgatgacg
gtggaccgcatcgctcagatcaacacgcagaacatccagcccgccgccatggccacgcag
ggcatcaagtcaaccaacatcagcacccagggcttgcacacggccacgggtcagatcact
gcgcaaaacatccaacctgtgcccatcaaccaacagcagccagtcattgagaacaagacc
tcagttgtgttagcagacggctccactctggtagccaaccccattggccagccgttcggc
agcacccagtcttccacctgcattgggcagacacacccccagaacactgggcctggtgcc
cccaccctgctgtcctccccccggcctagcatcctgcgcaagaagcctgccaatgaaggg
tctgctgtgaggaagaacctgatcccagaggccaccagccccaggatagatggaggcatc
aggcctgcatcaggtatgaagcacaaggctgatctccatgtgtccctggctcccccgttg
acgtcgtcctccatggaagcgctgcccagccatcagatcaatgagcagcagccctctcag
ccaatccagaccctcctctcagtgtccgcacccccacactcccagcctggccccgccatg
tccgccattactccaccaatctcgtctatggccaacgtggtggttccgcctacacaggca
gcggccagtagcacagcggcatgtggaataagctccaccctccctgagatcaagataaag
caggaagtggagcctatggatacctccaaagcgggtccccctatgccccattgcggtgcc
cccatattgtccatgatgcccggtggggacgtgatcctcggggcctcccccaggaagaag
ccccggaagcagcagcacgtcatctccacggaggagagcgagatgatggagaccaacagc
acagacgaggagaaggtcctggccagaccacacagcatgaggcccgagaaacgcaagtcg
ccccccaaggagtacatagatgaggagggtgtgcgttacgtccccacccgtgctcgcccc
ccggtcaccctcctccgccactacaggaacccctggaaggctgcctaccaccacttccag
agatacagtgacatccgggtcaaagaggagaagaagggcaccctgcaggacgtagccaat
cagaagggggtggtgtgcagagcgcagggctggaagatgcacctgtgtgctgcacagctc
atgcagctgactaatctggagcatgacgtgtacagccgcctcactaccctccaagagggc
ctgatcccaaagaagaaggccgggtcagatgatgacatgcaccgtatcaacgagctcata
cagggtaacatgcagcgctgtaagctggtgatggaccagatcactgaagctagagatgcc
atgatgaaggtgctggaccacaaggagaaagtcatgaagttaatcaacaagaacggcgga
gcgaagaaagtcaacaagctgaagcgcaaggacaaagcctag
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