Salmo trutta (river trout): 115169906
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Entry
115169906 CDS
T08542
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
stru
Salmo trutta (river trout)
Pathway
stru03320
PPAR signaling pathway
stru04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115169906
03320 PPAR signaling pathway
115169906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115169906
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115169906
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115169906
Nuclear receptors [BR:
stru03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115169906
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
115169906
NCBI-ProteinID:
XP_029581877
Ensembl:
ENSSTUG00000037686
UniProt:
A0A674CVI8
LinkDB
All DBs
Position
31:29815623..29843242
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AA seq
509 aa
AA seq
DB search
MRIIAGVGDSGGKEESDLIDISQSELDMYVNYQPLMLLPDFDSSSVQVSHLSSTPSQSLS
TMVGPPHHHPYHHHHHHHHHHPSVISASVNPGQPLPSPMSTLGSPFNGQGGSPYSVITSS
SLASPGVSIPPTPTMGFSTLSSPQMNSLNNVSSSEDIKPPPGLAGLGHMNSYGCMSPGSM
SKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLSYTCRDSKQCLIDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRGREKSDNEVESTSSFNEDMPVEKILDAELAIEPKTEAYM
EASAGNSKNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAI
VLFNPDAKGLSNPTEVEALREKVYASLESYTKHRYPEQPGRFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcatagcaggtgtcggagattccggaggaaaagaggaaagcgacttaatagac
attagccaatcagagttagatatgtatgtaaactaccagcccctgatgctccttcctgac
tttgacagttcttctgtgcaggtctcgcacctgagctccaccccgtctcagtccctcagc
accatggtggggccccctcaccaccacccctatcatcaccaccatcatcatcatcatcac
cacccctccgtcatcagtgcctctgtcaaccccgggcagcccctcccgtctcccatgagc
accctgggctcgccgttcaacgggcagggcggctcgccgtactccgtcatcacctcatcc
tctctggcctccccaggtgtctccatcccccctactcccaccatgggcttcagcacgctc
tccagcccacagatgaactctctgaacaatgtgagcagcagtgaggacatcaagcctcct
ccaggcctagctggactgggtcacatgaacagctacggctgcatgagcccagggtccatg
tccaagcacatctgtgccatctgtggggaccgatcctcagggaaacactacggcgtgtac
agctgtgaaggctgcaagggcttcttcaagagaaccatccggaaggacctcagctacacg
tgtcgagacagcaagcagtgcctgatcgacaagcgccagcgcaaccgctgccaatactgc
cgctatcagaagtgtctggctatgggcatgaaaagagaagcggtgcaggaggagcgtcag
cggggccgggagaagagtgataacgaggtggagtcgaccagtagttttaacgaggacatg
cctgttgagaagatactggacgcggagctggctatcgaacccaagactgaagcctacatg
gaggcgagcgcaggcaactctaagaacgacccggtcaccaacatctgccaggcagcagac
aagcagctgttcaccctggtggagtgggccaagaggatcccccacttctctgagctgccc
ctggacgaccaggtcatcttattacgggcaggttggaatgagctgctcattgcctcgttc
tcccaccgctctgtgacagtgaaggatggtatcctattggccacggggctccacgtacac
cgcagcagtgcccacagtgccggggtgggctccatctttgacagggtgctgacggagctg
gtgtctaagatgaaagacatgcagatggacaagactgagctgggctgcctccgagccatt
gtcctcttcaacccagatgccaagggcctgtctaatcctacagaggtggaggccctgaga
gagaaggtgtacgcctcactggagtcctacactaaacacagatatccggagcagcctggc
agatttgccaagctgttgctgcgtttgcctgcactacgctccattggcctcaagtgtctg
gagcacctcttcttcttcaagctgataggagatacgcccatagatactttcctcatggaa
atgctcgaagcgccgcaccagatcacatga
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