Salmo trutta (river trout): 115169915 Help Entry 115169915         CDS       T08542                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:stru03000]     115169915    04121 Ubiquitin system [BR:stru04121]     115169915 Transcription factors [BR:stru03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     115169915 Ubiquitin system [BR:stru04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     115169915 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  115169915 NCBI-ProteinID:  XP_029581893 Ensembl:  ENSSTUG00000044457 LinkDB All DBs Position 31:complement(30124916..30158139) Genome browser AA seq 1111 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVLKVQPVALITSPEDSLHYEEARQCVEELALYLKPLSNNRGVG LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGLALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNQLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSSGLLSDDCLPLDMGVTRKPS PLTNGSAGHPMPQLITRGTDAVTYDLLCKPKMDGGSSSSPRSPPDSLESGPKQGFLQPHL AMGHPRGPGDPMPKQIPVGVMPRGPQMYPQQLPDMYYSDSRPLPSASQYEPSQYPQGYPC QQPPQYSTQRYIRSLPTPSEPAGPPYQDPYPGYGPTERPYPAPHSTPPYSYLPHYDTRGR HGPYPGPQPYPSQRDDMVRMSPAPLDVPPNHLYHQEQVTRERYPPEGYYPTGAQPQSMRS NVREQYRRSSQPSLDYLHHRRKELMAQLEERKVISPPPFAASPTLPHAFPSDYPPEYGEE TSKAFGKCREPDYAGQYSPWSCDTIGSYIVTKDAKPKDIMVPGAMEMMNVDGKGLRGEPS MEAQARRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMASAQGPKHMAA AEFSYGHHGGWGSASYPSHQTGSSSQGHFSEKLPMPAQDREHLKIELQQVNQQITQQTQI HGMEREVSALAAQPSQPCENQGQQGKWPGPAGVSSNAALVSSEQLSMELHQVEREIGKRT RRMAMDSQVAHEVQYKMKSAQNGQQDHKTQLEEIALALGEVSNGSSGLGQDGGVGGAMLS LTNKASSLSLCSEPGPGVSELQKNGVVHSCS NT seq 3336 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagccccacaatggacggagttcctgctgtgtcccatctgcacgcagacg ttcgaggagacggtgcggcggcccatctcgctgggctgtggccacaccgtctgcaagatg tgcctgaacaagctacaccgcaaagcctgcccctttgaccagacagccatcgccaccgac atcgagcagctgccggtaaacacagccctactgcagcttgtggggggacaggttctcaag gttcagccggtggccttgatcaccagtccagaggactcgctgcactatgaggaggctagg cagtgtgtagaggagctggccctctacctcaaacccctcagcaacaacagaggggtgggc ctaagcagcacagcccagagcatgctgagtcggcccatgcagaggaagctggtgaccctg gtccactgtcagctggtggaggaggagggccgggtgcgggccatgagggcagccaggtct ctgggggagcgcacggtcacagagctcatcctacagcaccagaacccccagcaattgtca tccaacttgtgggctgccgtccgggcccggggctgccagttcttgggcccagccatgcag gaggaggctctgaagctggtgctgctggctctggaggatggcttggccctgtccaggaag gttctggtgctgtttgtggtccagaggttagagccacgcttcccccaggcctccaagacc agcataggccacgtggtgcagctcctctacagggcctcctgcttcaaggtgacgaagcgc gacgaggactcgtccctgatgcagctgaaagaggagttcaggacgtatgaggcactgcgg cgcgaacacgactcccagattgtgcagatcgccatggagggcggcctccgcatcgctccc gaccagtggtcctccctgctctatggggaccagtcccacaagtcccacatgcagtccatc attgacaagttgcaaacgccagcgtcgtttgcccagagcgttcaggagctgaccatcgcc ttgcagaggacgggcgaccccgccaaccttaaccagctccgaccacacctggaactactg gccaacatcgaccctagccccgacgccccccctcccacgtgggagcagctggagaagggt ctggtggcggtgaagacggtggtccacggcctggtggacttcatccagaaccacagcaag aagggcgccgacccacaacagcctccccagcacagtaaatacaagacgtacatgtgtcgg gacatgaagcagaaggggggctgtccccgaggagccagctgtaccttcgcccactctcag gaggagctggagaagtaccgtaagatgaacaagcgtttggcggctcgcctccctggctca tccggcctgctgtcggatgactgtctccctctggacatgggggtgacccggaaaccctcg ccccttaccaacggctcggctggacaccccatgccccagctcatcacccgcggcacggac gccgtgacctacgacctgttgtgcaagcctaagatggacggcgggagcagcagctccccg agatcgccccctgattctctggaatcggggcccaaacaagggttcctccagccccacctt gccatgggccaccccagggggccaggggaccccatgcccaaacagattcccgtaggtgtg atgccccgggggcctcagatgtacccccagcagctgcctgacatgtactactccgactca cgcccactgccctccgcctcccagtacgagccttcgcagtacccccaaggatacccctgc cagcagcccccccagtactccacccagcgctacatccgaagcctccctacccccagcgag cccgctggacccccctaccaggacccctatcccggctatggccctaccgagcgcccttac ccagctccccactccacccccccctactcctaccttccccactatgacacccggggccgc cacggcccttaccctggcccccagccatacccctcgcagagggacgacatggtccggatg agccctgctccgctggacgtgccccctaaccacctctaccaccaggagcaggtgaccagg gagaggtaccccccagaaggatactacccaactggggcccagccccaatctatgaggtcc aacgtcagggagcagtacagacgttcctcccagcccagcctggactacctgcaccaccgc cgcaaggagctgatggcccaactagaagagaggaaggtcatctccccaccacccttcgct gcctcccccacccttccccatgccttccctagtgactaccccccagagtatggggaggaa acctccaaagcctttgggaagtgcagggagccggactacgcaggccagtattctccctgg tcctgtgacactatcggctcctatattgtcaccaaggacgccaagcccaaagacatcatg gtgcctggtgccatggagatgatgaatgtggatggtaaaggtctacggggggagccctcc atggaggcccaggccaggcggggggcggaggtaaaagacgacgaccccatcatccccttc ggcccccagcccaccgtgtcgcgcttcggggccatctcacgcacctccaagacaggctac cagacgacaggccccgtgcaggccatggcctccgcccagggacccaagcacatggccgca gcagagttctcctatgggcaccacggaggctggggcagcgcctcctacccctcccaccag actggctcctcctctcagggacacttcagtgaaaagctgcctatgccagctcaggacaga gagcatctgaagattgagctccaacaggtcaaccagcagatcacccaacagacccagatc cacggcatggagagggaggtcagtgccctggcggcccagccctcccaaccatgtgagaat cagggccagcaggggaagtggcccgggccagcgggggtttccagcaacgctgccttggtg tccagcgaacagctcagcatggagctgcaccaggtggagagggagattggcaagaggacc cgccggatggccatggacagccaggtggctcatgaagtccagtacaagatgaagtctgca cagaatggccagcaggaccacaagacccagctggaggagattgctctggccctcggtgag gtatctaatggctccagcggtctaggtcaggatggtggtgtgggcggagccatgttgtca ctgaccaataaagcgtcttcgctcagcctgtgttctgagccggggcccggggtctcagag ctgcagaagaacggtgtggtccattcctgctcctag

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