Salmo trutta (river trout): 115169982
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Entry
115169982 CDS
T08542
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115169982 (pif1)
03029 Mitochondrial biogenesis [BR:
stru03029
]
115169982 (pif1)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115169982 (pif1)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115169982 (pif1)
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
115169982 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
DEAD
Herpes_Helicase
Mg_chelatase
ABC_tran
RsgA_GTPase
AAA_7
AAA_16
PhoH
AAA_5
Motif
Other DBs
NCBI-GeneID:
115169982
NCBI-ProteinID:
XP_029582017
Ensembl:
ENSSTUG00000048697
UniProt:
A0A674EPF5
LinkDB
All DBs
Position
31:32159945..32171330
Genome browser
AA seq
637 aa
AA seq
DB search
MFQGDDGAQFQCSVVVERLNSSGQATKRQVIRKAAVLLGRNEFQEIILRVHDGKVPQSYT
LKEFQLFTRFVKDGKCTVKLLPENIQVLISDCPPHLLNIFLKTLSIKHQAWQTSKPVTDR
EKLKACLPRSFETISPLQQKDVQKANELRSKVNAPVLSRGLVVRTGNKMTGGEQVKRPRT
DCDSSPLKALHPSKKPSLSLPTARKLNKEQAAVLSAVLSGKNVFFTGSAGTGKSFLLKRI
VGSLPPKSTYATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCR
HLIIDEISMVEAQFFDKLEAIARSLRRSTEPFGGIQLIVCGDFLQLPPVSKGKDKATFCF
QSRSWRKCIHLNMELTEVRRQTDQSFISLLQAVRVGRVTEEFTAKLMKSAYHKIERDGIL
ATRLCTHKDDVELTNDNKLQQLPGSVRVFEAVDSDPALVKTIDSQSPVSRLLQLKVGAQV
MLTKNLDVQRGLVNGARGVVVDFQPGKLGLPRVRFLCGTTEALKPERWMFKAGGGLYLSR
QQLPLKLAWAISIHKSQGMTLDCVEISLARVFERGQAYVALSRAKSLEGLRVMDFDPHVV
RADPDVLHFYSKLRKERLLLQASMNEFVGKSNKENRW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaggggacgacggtgcccagttccagtgcagtgtcgtggtggagcgcctgaac
tcgtctggccaggccaccaaacgccaagtcatccggaaggcagctgttcttctcggtcgc
aacgagttccaggagataatcctgcgcgtgcacgacggtaaagtgccccaaagttacacg
ctcaaagagttccagctttttaccaggtttgtcaaggatggcaagtgcaccgtcaaactg
ctcccagaaaacatccaagtgctcatctctgactgcccgccccacctactaaacattttc
ctgaagaccttgagtatcaaacaccaggcctggcagactagcaaacctgtgacagaccga
gagaagctgaaagcctgtctgccccgcagcttcgagaccatcagcccattacagcagaag
gatgtacagaaggccaatgagctgaggagcaaagtgaacgcaccagtgctctctagaggt
ctggtagtgaggactggtaataagatgactggaggagagcaggttaagagaccaaggacg
gactgtgactctagcccattgaaggcactccacccaagcaaaaagccctccctgtctcta
ccaacggcacgcaagttgaacaaagaacaagccgctgtcctcagtgctgtgttgagtggg
aagaatgttttcttcaccggcagtgcaggcacagggaagtccttcctgttgaagaggatt
gtgggctcgctgccgcccaaaagcacctacgccacggccagcacgggcgtggcagcgtgt
cacatcggggggaccacgctacacaactttgctggtatcgggtcaggctcagcccctctg
gagcagtgtatagagctggcccagaggcccggggtcctgcagcactggactagctgtcgc
cacctcatcatcgatgagatctccatggttgaggcccagtttttcgacaagctggaggcc
atagccaggtctctgaggaggtccacagagccgtttggaggaatccaactgatagtgtgt
ggggacttcctccagctgcccccggtctccaagggaaaggacaaggccacattctgcttc
cagtctagaagctggcggaagtgcatccatctgaacatggagctgaccgaggtgcgcaga
cagactgaccagtctttcatctccctcctgcaggcagtgagggtgggcagagtcacagag
gaattcactgccaagttgatgaagagcgcctatcacaagatcgagcgggatggtatcctg
gcaaccaggctttgcactcacaaggacgacgtagagctcactaacgacaacaagctccag
cagctgccagggtcagtgcgggtgtttgaggcggtggacagcgaccctgcactggtgaag
accatagacagccagagtcctgtcagcaggctgctgcagcttaaagtgggggctcaggtc
atgctaacaaagaacctggatgtccagcgtggcctggtcaacggggctcgaggtgtcgta
gtggactttcagccgggaaaactagggctcccacgtgtgcgtttcctgtgcggcaccact
gaggcgttgaagccagagcgctggatgttcaaggccggaggcgggctctatctgagccgc
cagcagctgccactcaaactggcctgggccatctccatccacaagagccagggcatgacg
ctggactgtgtggagatctccctggcgcgggtgtttgagaggggccaggcctatgtggcg
ctgtctcgggccaagagcctggaggggctaagggtcatggactttgacccccacgtggtc
cgtgccgaccccgatgtgctgcacttctacagcaagctgaggaaagagaggctactgttg
caggcttcaatgaatgagtttgtgggcaaaagtaacaaggagaaccgttggtga
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