Salmo trutta (river trout): 115170011
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Entry
115170011 CDS
T08542
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115170011
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115170011
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115170011
NCBI-ProteinID:
XP_029582063
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Position
31:complement(32723464..32725203)
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AA seq
244 aa
AA seq
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MLMRISPCAIEMAKPLDHIKRPMNAFMVWSRGQRRKMSLENPKMHNSEISKRLGAEWKLL
SESEKRPYIDEAKRLRAQHMKDHPNYKYRPRRKPKSLLKKDRFLFPFPFLGDAEHLKGFS
TESILASAEKARALLPPTSSPYSLLDPGQFGTGAVQRISEIPHALAANGLSYAPSLGYQT
GAFGSLGCPSQHTHTHPSPTNPGYALPCNCGTWSATGLQPQVAYILFPGMAGIDPYSCSP
HSSV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcgcatttcaccgtgcgctattgagatggcaaaacctttggatcacataaag
aggcccatgaacgctttcatggtgtggtctcgcggtcagagacgaaagatgtcactggag
aatcccaaaatgcacaattctgaaatcagtaaaagacttggcgcggaatggaagttgctt
tccgaatcagagaagcgaccatacattgacgaagccaagagattgcgcgcgcaacacatg
aaagatcaccccaactacaagtacagacctcggcgcaaacccaagagcttgctaaagaag
gaccggttccttttcccctttcccttcctcggggacgcagaacatttgaaaggattttcc
accgagtccattttggcttccgctgagaaagctagagcccttttgccgccgacgtcgtca
ccatactcgctccttgacccaggtcaattcggcaccggtgctgtccagaggatctcagaa
attccccacgcgctggctgccaacggcttgtcctatgcgccctctttgggataccagact
ggcgcgtttggaagtttgggatgccccagccagcacactcacactcacccgtcccccacg
aacccggggtacgccttgccctgtaactgtggcacttggtcggcgacgggtttacagcct
caggttgcatacattctttttccaggtatggccggcatagacccgtactcctgttcacca
cattcaagtgtgtga
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