Salmo trutta (river trout): 115170036
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Entry
115170036 CDS
T08542
Name
(RefSeq) transcription factor HES-1-B-like
KO
K06054
hairy and enhancer of split 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03460
Fanconi anemia pathway
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115170036
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115170036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115170036
03400 DNA repair and recombination proteins [BR:
stru03400
]
115170036
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
115170036
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
115170036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
MAJIN
Motif
Other DBs
NCBI-GeneID:
115170036
NCBI-ProteinID:
XP_029582131
Ensembl:
ENSSTUG00000037184
LinkDB
All DBs
Position
31:33314342..33316738
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AA seq
262 aa
AA seq
DB search
MPADILEKTSPSSVAATPSGVNGNPDKLRTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRLQITGAISTDPSVLGKYRAGFSECMSE
VTRFLSTCEGVNMEVMSQLLSHLAGCVSQINTVNYSTHRQSLPYPPHPTLGQAIVQIPSA
SPQNVIMPCKSGSPINFTSEVAKLYSGLQIVSATDGQFAFLIPSAALAHMSVPNALHGNP
TVAVAVSPVAPPITADSVWRPW
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgatattttggagaaaacttccccatcttctgttgcagccactccgtcgggc
gtaaatggaaatccagataaactaaggactgcctcagagcacagaaagtcttctaagcca
attatggagaagagaagacgcgcgcgaatcaacgaaagccttggacagctcaagacactc
atactggacgctctaaagaaagatagctccaggcattcgaagctggagaaggcagacatc
cttgagatgactgtgaagcacctaaggaatatgcagcgtcttcaaattactggcgctata
agcacggatccatcagtccttggcaagtacagagcgggattcagcgagtgcatgagtgaa
gtcacccgttttctgtccacatgtgaaggggtgaacatggaggtcatgtcccaacttctc
agccacttagccggttgtgtgtcacagatcaacaccgtaaactactcaactcatcgccag
agcctcccctaccctccgcatccaacgcttggccaagccattgtgcaaatcccaagtgcg
tcgcctcagaatgtaatcatgccttgcaaaagtggctcgccaatcaacttcacatcagaa
gtggcaaaattatacagtggacttcagattgtgtcagcgacagatggacaattcgccttt
ctgattccaagcgcggcccttgcgcatatgagcgtgccaaacgccctacatggcaatcca
acagttgcggtggcggtgtcacctgttgcacctcccatcactgcagactccgtgtggaga
ccatggtag
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