Salmo trutta (river trout): 115170038
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Entry
115170038 CDS
T08542
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
stru
Salmo trutta (river trout)
Pathway
stru03272
Virion - Hepatitis viruses
stru04382
Cornified envelope formation
stru04514
Cell adhesion molecule (CAM) interaction
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115170038
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115170038
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115170038
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115170038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115170038
04147 Exosome [BR:
stru04147
]
115170038
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115170038
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115170038
Exosomal proteins of colorectal cancer cells
115170038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF6479
OppC_N
DUF1218
Motif
Other DBs
NCBI-GeneID:
115170038
NCBI-ProteinID:
XP_029582133
Ensembl:
ENSSTUG00000037208
LinkDB
All DBs
Position
31:33336591..33339917
Genome browser
AA seq
211 aa
AA seq
DB search
MANAGIQLLGFVLAFLGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEQKGKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACLTIIGGA
FLCCNCSSKGSGKSSRYPPNHSAAPPGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcggggatacagctccttggattcgtcttggcttttcttggcttcatcggg
ttgatagcatccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcctgtgtgtcacagagcactggt
caaatccagtgtaaagtgtacgattcactgctccaactaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgctggctggcattgccatcctggtggccatggtg
ggcatgaagtgtaccacctgtctggctgaggaccaggagcagaagggcaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctatgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaattccaggtatgag
tttggcaaggccctgttcgtaggttggggctctgcctgcctcaccatcataggtggagcc
ttcctctgttgcaactgctccagtaaaggctccggaaagtcctcccgctaccccccgaac
cactccgctgccccgccaggcagagactacgtctag
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