Salmo trutta (river trout): 115170124 Help Entry 115170124         CDS       T08542                                  Name (RefSeq) collagen alpha-4(IV) chain-like   KO K06237   collagen type IV alpha Organism stru  Salmo trutta (river trout) Pathway stru04382   Cornified envelope formation stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115170124  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115170124   09142 Cell motility    04820 Cytoskeleton in muscle cells     115170124  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115170124  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115170124    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115170124 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115170124 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115170124 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115170124 NCBI-ProteinID:  XP_029582299 LinkDB All DBs Position 31:36165997..36252291 Genome browser AA seq 1662 aa AA seqDB search MSPFACWVTFCSLPIWWIVLLHISEQRVNAGETLGSCDGRDCSVCSCLPAKGARGAPGKL GKQGPQGPDGIRGSAGPHGEKGRRGVEGPPGLDGKKGERGQTGHPGFPGIDGVNGHVGAG GNPGLPGLDGCNGTRGQTGIPGVHGTNGFPGPRGYLGPKGTKGEPVYDVSVPGLPGDPGP PGRSGSPGPKGHTGSAGPNGNNGPDGPPGDRGEPGDNGRSLPGIKGDEGDQGQPGPPGPE EIVEPPDFFYPKGGKGDKGLPGPCGPRGITGEKSYEGLKGETGIRGFPGPRGYIGSTGLP GTPGPQGYPGDQGFPGLIGRTGPTGFPGDKGFRGPSRQIYHNYTVAGYPGDPGPQGPRGP PGDIGEMGINGPPGPPGVLISTGQPGQLGYPGLPGPKGLKGEPGRYYTIEPIPGQPGERG RPGAKGFRGPPGYGGIYCVPGEPGIRGDDGDTGYPGVTGYKGEKGYNGECECTYENGHRG IPGPPGPRGPLGYDGLPGHSGEKGDHGYNGDPGSQGSHGNPGRPGYNGVKGQKGESYVTN YKGAKGDPGFNGPNGPFGATGRPGSDGFPGTVGDPGPPGDGYGGSVGDKGYPGPHGPVGP PGRPGPLGPGAPGRHGHQGPPGDAGLPGLPGQPGPRGEVLPCGPYNPGLPGLKGLLGPPG NPGPPGPLGFPGPTGSLGPQGMRGDDGTDGGTGPSGHQGCVGDNGDPGQPGINLDGPPGL PGPPGSPGWPGPPGDTFNTGPGPIGPPGLPGLLGPKGDPGLPGIPGPPGGLGPCGGVGYK GSKGDTGDPGPSGPPGPIECREKGAVGPPGASGPPGVRGPSGFRGDKGRKGAMGPPGRGV KGPAGVPGPPGPPGPVGAKGFSGSPGDPGFPGVTGTKGPRGYPGRDGSAVPGTPGRPGNP GSRGRQGERGFTGRDGQDGDQGYKGAKGHRGPPGSPGPVGVITIKGQKGSEGPPGEDGFT GPRGSKGPSGSPGKPGGNGQDGPPGYEKGLPGQPGRPGPPGPPGPRGPKGLSGIVGFPGP VGDKGDPGHTGPPGNPGLPGTTGLPGDPGDSIGQPGLPGPPGPPGESRTLASKGDPGDPG APGPRGSPGQPGVHGARGPLGGPGFPGPSGPPGRPGSPGPPGGILGGQGPKGNPGQPGPP GFPGPPGLHGLNGLQGQKGEKGARGPDVLGPRGPSGFPGVKGHTGSQGPPGTSYPGPKGL RGPPGYQGPKGLAGEPGGSGGECTECHRGPNGEPGYEGIHGPPGPPGEPGPAGTAEPSPG DPGPQGPPGPNGHKGQRGPPGPLGPTDYSGSQGPKGARGPEGHMGPNGPRGRPGAYGLLG PKGDKGRPGDAGPKGLPGQVLDGVVTTQEPHRGIHGPSGPLGPNGPPGKAGPRGNPGPHG PKGPAGSRGPPGRNGPPGPPGPLGDPGDHGQQGFVGHQGPPGSQGDRGYPGSTGSVSSGF LLVIHSQSVEVPVCPEGSSPLWTGYSLFYLEGQERTHTQDLGQAGSCLRIFSTMPFSYCN TGTCDYASRNDKSYWLSTTAAVPMMPVSGHDIRAHISRCAVCETPSPAVAVHSQDYIAPT CPPGWRSLWAGYSFLMHSGAGDEGGGQSLTSSGSCLRDFRAQPFVECQGPRGTCHYFANV YSFWLTHVSLDEQFGPGPVPSVLKAADQQRQQASRCHVCTKG NT seq 4989 nt NT seq  +upstreamnt  +downstreamnt atgagtcccttcgcttgctgggtgaccttctgttctctgcctatctggtggatcgtcctg ctgcacatctctgaacagagggtcaatgctggagagacgctgggctcgtgtgatggcaga gactgctcagtgtgcagctgtctccccgccaagggagcccggggggccccagggaagctg gggaagcaggggccacagggcccagatggcatcaggggctccgcagggcctcacggagag aaggggaggaggggcgtcgagggaccacctgggctggacggaaaaaaaggggaacggggt cagactggtcacccaggatttcctggtatcgatggtgtcaatggtcacgttggtgctggg gggaatcctggtctgccggggctagacggctgtaacgggaccaggggacagacggggatc cccggtgttcatggcacgaacggattccccggacccaggggatatctcggtcccaaagga acaaaaggggagcctgtctacgatgtatctgttcctggccttcctggcgaccctgggcct cctggaagatctggatcacctggacccaagggtcacacggggtctgctggacctaatgga aataatggtccagacggtccacccggggatagaggagaaccaggtgacaatggcagatca ctgccgggcattaaaggtgatgagggggaccagggtcaaccagggcctccggggcctgag gagatcgtcgagcctccagactttttctaccccaaaggaggcaagggggataaagggctt cctggaccatgtggacccagaggcataactggagaaaaatcctatgaaggactaaaggga gaaactggaatccgtggctttcctggccctcggggttacataggatctaccggcctgcct ggaacgcctggaccacagggctatcctggagaccaagggtttcctggtctgatcggcagg acaggaccaacgggcttcccaggagacaaaggcttcagaggaccgtcgcgccaaatatac cacaattacactgtagcaggttaccctggtgatcctggcccccaaggtccaagggggcca ccaggagacattggagagatgggcattaatggacctccgggaccaccaggggtattaatc tctacaggtcaaccagggcagctaggttaccccggtctccctggtcctaagggtttaaag ggggagccaggcaggtactacactatagagccaataccaggacaaccaggggaaagaggg cgtcccggagccaaggggttcagaggccccccaggatatggaggcatttattgtgttcct ggtgagccgggtatacgaggagacgatggcgataccggatatccaggagtaacgggatac aaaggagaaaaaggctacaacggtgagtgtgagtgtacgtacgagaatggtcacagaggg atcccaggtcctccgggcccccgcggacccctagggtatgacgggctgccagggcacagc ggagagaaaggtgaccatggatataatggggaccctggctcacaaggatcccacggaaac ccaggcaggcctggttacaatggagtgaagggacagaagggagagtcctatgtgaccaac tataaaggtgcgaagggtgaccctggcttcaatggccccaacggaccgtttggggccact ggtcggccaggatccgatggcttccctggcactgtgggagaccccggacccccgggtgac ggttacgggggctcggtaggtgacaaaggctacccagggccccatggtcctgtaggcccc ccaggcagaccgggccccctaggccctggtgctccaggccgtcatggccaccaagggccc ccaggggacgcgggcctcccaggtctccctggacaacctggacctcgaggcgaggttctg ccctgtggcccttacaaccctggcctacctggcttaaagggtctacttggtcccccaggg aatcctgggccaccaggaccacttggtttcccaggtcccacaggttcccttggacctcaa ggcatgagaggagatgacgggacagatggaggaactggaccatcaggacaccaaggatgt gttggagataatggtgaccctggtcaacctggaatcaacctggacggaccaccaggactc cctggaccaccaggctctccaggctggccgggacctccaggagacaccttcaacaccgga cctggtcccattggtccacctggactacctgggttactgggacccaagggagatcctggt ttgccaggcatccctgggcctccagggggactaggcccgtgcggaggtgtgggttacaag gggtcaaaaggagacactggggacccaggaccgagcggtcccccagggccaatagaatgt agagagaaaggagctgttggcccaccgggagcctcaggaccaccaggagtcaggggccca tcgggtttccgtggtgataaaggacgtaagggtgcgatgggtcctcctggacgtggagtg aagggaccagcaggggtccccgggcctccaggtcccccgggccccgttggtgccaagggt ttcagtgggtcaccaggtgacccgggcttccctggtgtaacagggaccaaagggcccagg ggatatcctggtagagatggatcggctgttcctggtacaccgggtcggcctggaaaccca ggatcccgcgggaggcaaggggagaggggttttacaggacgtgacggtcaggatggagac caggggtacaaaggagccaaaggtcatagaggtccccccggaagtcctggaccagtagga gtcataaccattaaaggacagaagggctctgaaggaccaccaggagaggacggcttcact ggacccagaggttccaagggtccaagtgggtcaccaggtaaaccaggggggaatggacag gatggtccccctggatatgagaaagggctcccaggacaacctggcagacctggtcccccc ggaccccccggacctcgaggacctaaaggcttgagtggtatagtgggtttccctggacca gtcggtgataagggggaccctgggcacacaggacctcctgggaacccaggccttccagga acgacaggcttaccgggtgacccaggagactccataggacaaccaggactacctggacca ccgggtcctccaggagaaagcagaaccttagcttcaaagggggacccaggagatccaggg gccccaggacccagaggatcaccaggacagcctggtgtccacggagcccgaggcccacta ggtggcccaggttttcctggtccctcaggtccgccgggtcgcccaggctccccagggcct cccggaggaattctcggaggtcaaggtcccaagggcaatcctggacagcccggtcctcca ggttttccgggacccccaggtctgcatggtctgaacgggctacaaggccaaaaaggagag aagggagcaagaggaccagatgtgttgggcccacgagggccatctgggttccccggagtc aaaggccacacaggctcccagggacccccgggaacttcttaccccggacctaaaggccta aggggccctccaggctaccaaggaccaaaaggactcgctggtgagcccggtggttcaggt ggagagtgcacagaatgtcacagaggacccaacggagaaccaggatacgaaggcattcac ggacctccaggaccacccggtgaaccgggtcctgctggtactgcagagccatctccagga gacccaggcccccaagggccaccagggcccaatggccataaaggacagagaggcccccca ggacccctagggccaacagactactcaggatcacaaggacccaaaggtgccagaggccct gagggtcacatgggccccaacggaccaagaggtcgtccaggcgcctatggcctcctgggg cccaaaggtgacaaaggcagacctggggatgcaggtcccaaaggcctgcccggtcaggtt ttggatggtgtcgttaccactcaggaaccccaccgtgggatccatggcccctcaggtcca ttaggtccaaatgggcccccgggaaaggctgggccccgtgggaaccctgggcctcacggt cctaagggcccggctgggtcacgagggcccccagggagaaatggacctccaggtccacct ggacctttaggagacccaggcgatcatggacagcaaggttttgtgggacatcagggtcct ccgggttctcagggtgaccgtggctaccctggttccactggctctgtgagttcaggcttc ctgctggtgatccacagccagtcagtggaggtccctgtgtgtcccgagggcagcagcccc ctgtggaccggctacagcctgttctacctggaggggcaggagaggacacacacacaggac ctgggccaggccggctcatgtctgcgtatcttcagcaccatgcccttctcctactgcaac acaggtacctgtgactacgccagccgcaacgataagtcctactggctttccaccaccgct gccgtgcccatgatgcccgtgtcgggccacgacatccgcgcccatatcagccgctgtgcc gtgtgtgagacaccctcgcccgctgtggcagtgcacagccaggattatatcgcccccacc tgcccgcctgggtggaggagtctgtgggctggctactccttcctcatgcactctggagcg ggcgacgagggtggcggccaatctctgacctcatccggcagctgcctgcgagacttccgt gcccagccctttgtggagtgccagggcccgcggggcacatgccactacttcgccaatgtc tacagcttctggctgacccacgtttccctggacgagcagtttggccccggccccgtccct agcgtgttgaaggccgccgatcaacagcgccagcaggccagccgctgccacgtgtgcacc aagggctga

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