Salmo trutta (river trout): 115170125 Help Entry 115170125         CDS       T08542                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism stru  Salmo trutta (river trout) Pathway stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115170125  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115170125   09142 Cell motility    04820 Cytoskeleton in muscle cells     115170125  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:stru04147]     115170125    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115170125 Exosome [BR:stru04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115170125 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115170125 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115170125 NCBI-ProteinID:  XP_029582303 LinkDB All DBs Position 31:complement(36099652..36147652) Genome browser AA seq 1534 aa AA seqDB search MGQPGSPGCNGTEGERGPTGPAGPCGVDDGLRGLPGAPGPKGESQMFIGIGQPGRPGPRG RDGDQGVRGVTGPTGQQGDVGPRGAVGLLGLPGAPGLKGQEGRSSSIPGSCGPKGHQGPP GVPGPKGIKLYAHAPSDLKGETGDLGEKGCKGSPGYAGQVNFKEKGDQGGIGTEGRPGKD GHQGPAGYEGRKGNPGLAGPDGIPGPWGQKGDQGQDGDPGEVTMIGCAVIGPKGQPGFTG PLGPTGVTGPPGVTGFQGPPGSPGPNYEGDPDNRGVKGHSGPKGDKGDPGPIIQGEPGRE GSQGTTGDLGPPGPPGDSDNLKGLIGPPGAKGAKGEQGYRGQYGLKGEKGEVCSLCTGKG SGEPGLPGSPGQPGLPGFSAGPGPKGEPGLKGPSGSPGQQGLHGPSGVPGPPGPKGNSGS RNHQGIKGEKGAPGPAGRSGLDGLYGAPGFRGRKGQQGPKGDPYYGPLGLKGDIGVPGPP GPQGYPGPDGSPGPVGIGPLGPSGPKGNSGVPGLPGTPGYRGQKGEPCSSVSDQGVPGLP GKVGLPGTRGPPGPRGGAGNPGEKGDRGVFSTLGRRGPTGQKGDKGQPGRPSTSGSGNPG RPGVMGFPGAPGPKGDAGFEILGPAGLKGFPGGVGAQGPPGDPGVLGRPGSPGPPGLNGS SGPKGSKGVDGSQGPPGYAVTCCTEAPTGPPGLSGRPGPPGINGEMGSRGDPGAPGFGSS GPAGDPGPPGASGPGVQGLTGQMGGRGREGLPGASGPRGDPGLEGRSGPGPDGPPGPEGP PGPKGSVGPDGEKGHRGVPGSVGDDGPPGPCGPSSNTDIHGPPGDPGKRGLPGFHGAKGH PGYPGPKGIDGRDGDPGNGPRGCPGDPGAVGLCSGGPGPSGLRGNMGLMGLPGPHGIKGG PGSNGDPGVDGMPGPCGPKGTKGESSCAKPGLPGSPGQKGEPALYNKHDSKGMKGSPGYA GPPGSQGPSGAKGDPGHHGHHGARGPAGQPGTDGPPGPPGLPVSHGAPGQPGLPGPPGPY GPKGNQGHDGIPGPAGQKGETLIVRSTPGPRGKNGLPGPKGDVGFPGPTAPGPPGCPGDQ GHRGNEGPQGSRGRPGFGGVCVNGLKGDAGPQGSPGSPGQRGPQGQPGSGGYECKGDKGD LGAPGGRGLDGPTGDLGPPGLRGPGAIPGPPGPIGSPGHSGTPGVPGEMGDPSYNPGPKG TNGSKGRPGPPGGPGLDVPMRPEKGDPGPPGYTGNQGPPGPSGSPGQPGLTGPPGPEGQQ GHSPLGLPGFPGRKGDKGSPGLTGPLGYQGFPGQKGPLGPRGCSTAGLADSFLLARHSQT IRVPDCPQGTTLIYSGYSLLFINGNKRAHGQDLGSMGSCLPRFSTMPFLFCDTNDTCRYA ARNDYSYWLSTEKPMPHSMDLIRGDEISSYISRCSVCEGSSNAMAIHSQTARLPDCPGDW ESLWTGYSFVMQTGAGAEGSGQPLGSPGSCLEHFRQVPFIECHGRGTCNYFPDSYSFWLA LLDPNHMFSKPVPQTVKGRLLENVISRCRVCRKP NT seq 4605 nt NT seq  +upstreamnt  +downstreamnt atgggccagccaggttccccaggatgcaatgggacagagggtgagagaggtcctactggt ccagctggtccctgtggtgttgatgatggattaagaggtttacctggagcacctggacca aagggtgaatcccaaatgtttattgggattggacagccagggagacctggaccccgagga agggacggtgaccagggtgtccgtggggtaacaggaccgacaggacaacaaggggacgtt ggaccccgtggtgccgttggattgctaggtctacccggggccccagggttaaagggtcaa gagggacgcagctccagtatccctggctcttgtggtccaaagggacaccaagggccccct ggagtcccgggacccaaagggatcaagctatatgcccacgctccctccgatttgaagggg gagacaggggatctgggtgagaagggctgtaagggttcacctggttatgctggccaggtc aactttaaggaaaaaggggaccaggggggcattggcactgagggaagaccagggaaggat gggcatcaagggcccgctggatatgaggggagaaaggggaatcctggtttagcaggacct gatggaatacctggaccgtggggacagaagggcgaccagggtcaagacggagaccctggg gaggtgaccatgattggctgtgccgtaattggcccgaaaggacaaccaggatttactggc cccctggggcccactggggttactggtcccccaggtgtcactggtttccaggggcctcct gggtctccaggtcctaactacgaaggagatcccgacaatcggggagtgaagggccacagt gggcctaaaggggataaaggagacccaggacccatcatccagggagagccaggcagggaa ggctcacaaggaacaactggagaccttggacccccgggaccacctggagactctgataat ctgaagggccttataggacctccgggggcaaagggagccaagggagaacaagggtacagg ggccaatatggattgaaaggtgagaaaggggaggtctgtagtttgtgtacgggaaaaggg tctggagagccgggactcccaggttcccctggtcagcctggactcccaggctttagtgca ggaccaggacccaaaggagagccaggactcaaaggaccctcgggatcacctggacaacag ggtctccatggcccttcaggtgttccaggacccccagggccaaaaggaaattcaggttcc cgcaaccaccaggggataaagggagagaaaggagccccaggaccagctggtagatcaggg ctggacggcctatacggggcccctggcttccgtggacgcaagggccaacaaggccctaag ggtgatccatactatgggccactgggtctgaagggagatattggtgtcccaggccctccc gggccacagggatacccaggaccagacggttcaccaggtccagtaggcataggaccgctt ggcccctcaggacctaaaggcaatagtggggtaccaggtctacctggtacacctggttac cgaggtcagaagggtgagccctgcagcagtgtgtctgaccagggagtcccaggcctaccg ggaaaggtggggctgccgggcacacggggccccccaggtcctcgtggtggtgctggtaac ccgggggagaaaggggataggggtgtattctccaccctgggaagacgaggacccactgga cagaaaggtgacaaagggcagccgggacgcccaagtacctctggaagtggcaatcctgga cgacccggcgtaatgggattccctggggctccagggccaaagggtgatgctgggtttgag atcctaggtccagccggccttaaaggtttcccaggtggtgttggggcccagggccctcct ggagatccaggagtactgggccgaccagggagtccgggaccacccggcctcaatgggtcc tcaggccccaaaggaagtaaaggtgtagatggttcccaaggacctcctggttacgcagtt acttgctgtactgaagccccaaccggaccaccagggctgtcaggcagacctggaccccca ggtattaatggagagatgggttcgcgcggggaccctggcgccccggggtttggaagttca ggtccggctggtgaccctgggccccctggggcctccggacccggagtgcagggcctgact ggacagatgggaggcagagggagagaggggttaccaggtgcatcaggtcctagaggtgac cctgggctggaaggaagatctggaccgggccctgacggcccacctggacctgaaggacca cccggtcccaaagggtcggttggccctgatggggagaaaggtcacaggggtgtaccaggc tctgtgggggacgacgggcccccaggcccttgtggaccatcatccaatacagacatacat gggcccccaggggaccctgggaaacgtggtctgcctggtttccatggtgctaaaggacac cctggatatcctggacccaaaggcattgatgggagggatggcgacccaggaaatggcccg agaggctgtccaggtgatcctggggctgttggactgtgctcaggaggaccaggcccatct ggactcagaggaaatatggggctcatgggtctaccaggtccccatggaataaagggaggc ccgggttccaatggagacccaggagtagacggtatgcccggtccatgtgggccaaaagga actaaaggagagtccagttgtgcaaaaccaggcctcccaggatcacctggacagaagggc gagccagccttgtataacaaacatgactccaaaggaatgaaaggctctcctggttacgca ggtcctccaggctcccaaggaccctctggagccaaaggagacccaggacatcatggacat catggagcccgaggtcctgccggccaaccaggtactgatggtcccccaggccccccagga ctccctgtgtcacatggagctccaggacaaccagggttacctggccctcctggtccctat ggtcctaaaggtaaccagggtcacgatggcattcctggacctgctggtcagaagggagag acactgattgtgagatcaactcctggcccacgtggaaagaatggactgccaggtccaaag ggagatgtgggtttccctggccccactgctccggggcccccagggtgtccaggagatcag ggccaccgaggcaacgaaggaccccagggttctcgtgggaggccagggtttggtggtgtt tgtgtcaacgggctgaaaggagatgctggtccccagggcagccctggaagccctggacag aggggtccgcagggacagccagggtctggaggctatgaatgtaaaggggacaagggagac ctgggcgctccagggggcagaggcttggacgggcccacaggggacctcggacctccaggg ctacggggaccaggagccatccctggacctccaggaccaatcggttccccaggtcactct ggaaccccaggagtccccggtgaaatgggtgatcctagttataaccccggtccgaaaggt acaaatggatccaaaggccggccaggaccaccaggtggtccgggacttgacgtgccaatg agacccgaaaagggggatccaggcccacccggttacaccggcaaccagggacctccaggt cccagtgggtcgccaggacaaccaggattaacagggcccccaggtcctgagggtcaacag ggacacagccctctcggcctgcctggcttccccggacgcaagggagacaaaggatcgcca ggactgacagggccactgggctaccaggggtttccaggtcagaagggtcctcttggccca cggggctgcagcacggcaggcctggctgacagtttcctgctggcccgacacagccagacc atcagagtgcctgactgcccccaaggcaccaccctcatctactctggatactctctgctc ttcatcaatggcaacaaaagggctcacggacaagacctgggctccatgggcagctgcctg cctcgtttctccaccatgcccttcctgttctgtgacacgaatgacacttgtcgctacgcc gcacgcaacgactactcctattggctgtccacggagaagcccatgccacacagcatggac ctgatcagaggagacgagatcagcagctacatcagcaggtgttcagtgtgtgagggcagt tccaatgccatggccatccacagccagactgcccggctcccagactgtcctggtgactgg gaatccctgtggactggatactcctttgtcatgcaaacaggtgcgggtgctgaggggtcg ggccagcccctgggctccccaggctcgtgtctagaacacttccgccaggtccccttcatc gagtgtcacggccggggaacctgtaactacttccctgactcctacagcttctggctggcc ttgctcgaccccaaccacatgttcagtaagcctgtgccccagacggtgaagggacgtctt ctagagaatgtcatcagtcgctgccgcgtatgcaggaaaccatga

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