Salmo trutta (river trout): 115170229
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Entry
115170229 CDS
T08542
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115170229
03041 Spliceosome [BR:
stru03041
]
115170229
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115170229
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115170229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
FUBP_C
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
115170229
NCBI-ProteinID:
XP_029582485
LinkDB
All DBs
Position
31:42357155..42381526
Genome browser
AA seq
666 aa
AA seq
DB search
MADYSNVAPPSGNGAGMNDAFKDALQRARQIAAKIGGDGVPSAAPSGSEFGYGGQKRPLE
DADQPETKKVAPNDSFSAAMGMGGMGGGGMGGMGGGGMGGMGGGGGSRSSSEEFKVPDGM
VGFIIGRGGEQISRMQQESGCKIQIAPDSGGMPDRSVTLTGSPDSIQAAKRLLTEIVDKG
RPAPAFHHNDAGGPGMSVQEMLVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQNT
GADKPLRISGEPFKVQQAKDMVMELIREQGFREQRGEYGSRMGGGGGGGGGGGGGEGLDV
PVPRFAVGIVIGRNGEMIKKIQSDTGVRIQFKPDDGTTPERIAQIIGPPDQSQHAAEIIT
DLLRSVQQGGPGGPNGGGRGRGRGGNGGGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGE
TIKGISQQSGARIELQRNPPPNSDPNIKMFTVRGSHQQIDYARQLVEEKIGGPVSPMGGP
HGPPGPHGGPSPHGPPGPPGPPAQMGPYNPGPYNQGPPGPHGPPAPYQPQGWDNGFPHWQ
QGQPDPGKAAADANAAAWAAYYSQYQQQPQAPMTPTGGAPGNTQANGQGQQPQDYTKAWE
EYYKKQGQAAPQAAAAAAAGGQPGGQPGGQPDYSAAWAEYYRQQAAYYGQGSPQAMGAQP
QAPQGQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggctgactattcaaacgtggctccgccgtcgggaaatggcgcaggaatgaacgacgct
tttaaagacgcacttcagcgagctagacagattgcggctaagattgggggggacggcgtc
ccctccgcggcgccctcaggcagtgagtttggctatggaggccagaagcgaccccttgaa
gatgccgaccaaccagagaccaagaaggtggcacctaacgactcgttctcagcagcgatg
ggtatgggaggaatgggaggtggaggaatgggaggaatgggaggtggaggaatgggagga
atgggaggtggaggaggatcacggtcgtcgtcagaggagttcaaggttcctgacgggatg
gttggattcattattggaagaggaggagaacagatatcccgtatgcaacaagagtcgggc
tgcaaaattcagatcgcccccgacagtggaggaatgcctgataggtcggtgacactgacc
ggatccccagactccatacaagctgccaagaggctgctgacagagatcgttgataagggt
cgtcctgcaccagccttccaccacaacgacgccggcggccccggtatgtctgttcaggag
atgctggtccctgcctccaaggctggcctggtcatcgggaagggaggagagaccatcaaa
cagttgcaggagagagccggagtcaagatggtgatgatccaggaaggacctcaaaacact
ggagcagacaaacctctacgcatctctggagaaccttttaaagtccagcaagccaaagac
atggtgatggagctgatcagagaacagggcttcagggagcagagaggagagtacggctcc
aggatgggaggaggaggaggcggcggtggtggaggaggaggaggagagggcctggatgtt
cctgtccccaggtttgcggtaggaatcgtgatcgggagaaacggagagatgatcaagaag
atccagagcgacacaggagtcaggatccagttcaaaccagatgacggcactaccccggag
aggatagcccagatcataggtcctccagaccagtcccagcatgcagcagagatcatcact
gaccttctgaggagtgttcagcagggagggccgggcggtcctaacggagggggcaggggg
agaggcaggggaggtaacggggggggtaactggaacatgggtcctcctggtggactgcag
gagttcaccttcaccgtccctaccatgaagactggactcatcatcgggaaaggaggagag
accatcaagggcatcagccagcaatctggggctcgtattgagcttcagagaaaccctcca
cccaactccgaccccaacattaaaatgttcaccgtccgaggatcacaccaacagatagac
tacgcacggcagctggtggaggagaagatcgggggtccagtcagtccaatgggtggtcct
cacggcccaccaggcccccacggaggtccctctccccacgggccccccggcccacctgga
ccccctgctcaaatgggcccttacaaccccggcccctacaaccagggacccccaggacca
catggtcctcctgctccctaccagcctcagggttgggacaacggattcccccactggcag
cagggacagccggatcctggtaaagctgcagctgacgccaacgcggcggcctgggcggcg
tattactcccagtaccagcagcaaccccaggcccccatgacgccgaccggcggcgccccc
ggtaacacacaggccaacgggcaagggcaacaaccacaggactacactaaggcctgggaa
gaatactacaagaaacaaggtcaagctgctccccaggcagcagcagcagcagcagcaggt
ggtcagccaggtggtcaaccaggtggtcagccagactacagtgctgcctgggcagagtac
taccgccaacaagctgcgtactacggacagggaagcccacaggccatgggagcccagcca
caagcacctcagggccagtaa
DBGET
integrated database retrieval system
