Salmo trutta (river trout): 115170558
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Entry
115170558 CDS
T08542
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
stru
Salmo trutta (river trout)
Pathway
stru03420
Nucleotide excision repair
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115170558
09124 Replication and repair
03420 Nucleotide excision repair
115170558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
stru03051
]
115170558
03400 DNA repair and recombination proteins [BR:
stru03400
]
115170558
Proteasome [BR:
stru03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115170558
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115170558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Exotox-A_target
OTU1_UBXL
Ubiquitin_2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
115170558
NCBI-ProteinID:
XP_029582670
LinkDB
All DBs
Position
32:18818470..18826062
Genome browser
AA seq
353 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSTTAASTPSSEAPKAPVQDSASSSSAGLAPAAIPIPPEEPTP
TVAEPLAPASSDPSVEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNP
HRAVEYLLTGIPSSPVQETNPPAQLPASARTETPTVAEGENPLEFLRSQPQFQSMRQVIQ
QNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDAPEVGDLGAAVEEGAQ
VNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgctaaaaacactgcaacagcagaccattcaaattgacatagacccagat
caaacggtgaaggcactgaaggagaagatagaagcagagagggggaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacacctattaaa
gactacaaaattgacgagaagaattttgttgtagttatggtatctaaggcaaagtctacc
acagctgcttcaacaccttcctcagaggcacccaaggcccctgtccaggactctgcatcc
tcgtcatctgcgggcctggcccctgcagccatccctatccccccagaggagcccacacct
acagtcgcagagcccctagctccagccagctcagaccccagtgtggaggtccagggggga
gatgcctcctctgccttggtgacaggagcggagtatgagaccatgctgacagagatcatg
tctatgggttatgagagggagagagtggtagctgctcttcgggccagcttcaacaacccc
catcgggccgtggagtacctcctcactggcattcctagcagtccggtccaagagactaat
cctccagcacagcttcctgcatctgcccgcacagagacccctactgtagctgagggagaa
aaccctctggagttcctgcgttcccagcctcagttccagagcatgaggcaggtgatccag
cagaacccctcactgctgccagctctgctccaacagctgggccgggagaacccacagctc
ctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagccggcgggg
gaggtaggagacgcgcctgaggtgggggacctgggtgctgcagtggaggagggagctcaa
gtcaactacattcaggtcacgcctcaggagaaggaagccatcgagaggttaaaagcgttg
ggtttccccgaggcgctggtgatccaggcctactttgcctgtgaaaagaacgagaaccta
gcggccaacttcctcctgaaccagggctttgaggatgaatga
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