Salmo trutta (river trout): 115170583
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Entry
115170583 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2-like
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115170583
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115170583
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115170583
NCBI-ProteinID:
XP_029582710
LinkDB
All DBs
Position
3:complement(22978571..23131576)
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AA seq
1637 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMEENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPVVRGYHTLPADF
SRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLPETAVDS
EEDDDEEDIERSSDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRPEILCMGNSFGVSPTI
EKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTKERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGNKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEREKMYGHLRLLNIACAAKAKLRL
VTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILEVNGQNFENVQ
LTKANEILRNNTHLSISVKTNLLVFKELLARPEHDHEAEGEETPEVDRKNGAPAHLPKIG
DIKKGSRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPKPYND
VGVGQSQDDSIVGLKQSKQIPAALPVSGSLSSSNPDLLQSHHRILDFNNPPDMSDQVLRV
FKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSITPEGVIKQRRLPEQL
SKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTMEVATQLSMRAFEL
FCAIEPTEYIDDLFKLKSKTGSFCLKRFEEIINQETFWVASEVTREPNQLKRMKTVKHFI
KIALHCRECKNFNSMFSIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAK
YRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMAS
VNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKKLYEDAQ
MARRVKQVCPNLSLETNEEALQTLSLQCEPSINTLPKNAGGSKEARXRSPVVSRAASQQR
SHLQKGNQALQVPAVALYPSRKKXPVKDLPPFGTSSPQSLKKILSLSEEASERHKRQTED
TVSNTTSQLSSPPTSPQSSPKKGKLIIPSATPRTGDAYSDSGHSEISSRSSLVSNSSFDM
AQEERRGLRHSGGVGDPHAGGVRLERRATTDPDQYSLGSYSSMQDCRGLYTCATVLSPSS
EELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGPGGVVSMGVHP
PGGLKRYRGPLGLWASQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDVNADPET
SSITSMGSDEAKQHGRPSPITAGNKGLITRKESRYREPPPTPPGYTALTISDFSEGQTQS
PPPPTAPSHSGRRPPDYSTALQRSRMVTQSPDSQHHHQSQQHPGSGTTKRHGLHRTRSPA
RMKSRRRKEEDEQVSAV
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagttttcgtcaagctgtgatgatgaatccggcggaaaga
acgcaacaggacctggagatagtctactcctatctgcatgggatggaggccctgtctaac
ctcagagaacaccagctgaggataatgtgtgagacagtgcgctatgaaagacacgaagcc
aatgaagtgctctattacccggatgacgtcggaagctgctggtatatcctactgtccggg
tccgtcttcatcaaggagtccatgttcctgccaagaagcagttttggaaagcgttctgca
gggagcctgagacgtggatgtgagtgcatcgttctggaaccttcggagatgattgtggtg
gactatatggaggaaaatgaggagtacttccagaggcaagcatcacaccgacagtcccgc
cgcaggttccgcaagatcaaccagaaaggcgagcgacagaccatcatcgacacggtggac
ccgtaccccaccggcaagccgcccgtagtcaggggatatcacacgctccccgcagacttc
agccgactccacctggccgacggcttgcacccacaggtgacccacgtgtcttccagccac
tcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagacatatatcaggcc
acggaaaacgagccaggcgacatggacctcagcggcctgcccgagactgccgtcgactca
gaggaggacgatgacgaggaggacattgagcgatcgtcggaccccctcatgagccgcgac
atcgtgcgggactgcctggagaaggacccaatggaccgtaccgatgacgacatagagcaa
ttactggagttcatgcatcagctgccagcgtttgccaacatgaccatgtctgtgaggagg
gagctgtgtgccgtcatggtgtttgccgtggtcgagcgggccggcaccatcgtactcaat
gacggggaagagctggactcgtggtcagtgatcctgaatggctcggtggaggtgacgtac
cctgagggcaggcctgagatcctgtgtatgggcaacagcttcggggtctcccccaccata
gagaaggagtacatgaagggagtgatgaagactaaggtggacgactgtcagtttgtgtgc
atagcgcagcaggactactgctgcatcctcaaccaggtggagaagaacatgcagaaggtg
gaggaggagggcgagatcgtcatggtcaaggagcaccgtgagctggaccgcaccggcacc
cggaagggacacatcgtcatcaagggcacgaaggagcgtctgactatgcacctggtagag
gagcactctgtggtggaccccacctacatcgaggacttcctgttgacctacaggactttc
ctctccagccccatggtcgtgggcaacaagctcctcgagtggttccacgacccaagcctc
agggacaaggttacacgggtagtcttgctgtgggtgaacaatcacttcaatgactttgaa
ggcgaccctgcaatgactcactttcttgaagagtttgagaacaatctggagagagagaaa
atgtacggccaccttagactgttaaacattgcctgcgctgctaaagccaaactgcgacta
gtgacactgaccaagccgtccagggaggccccgctagccttcaccctgctggggggctcc
gagaagggttttcgcatcttcatcgacagtgtggagcccgggagcaaggccgcggaggcc
ggccttaaacgaggagaccagattctggaggtgaacgggcagaactttgagaatgtccag
ctcacgaaagccaatgagatcctgaggaacaacacccacttgtcaatttctgtgaaaacg
aatcttttagtgttcaaggagctcctagcccgaccagagcacgaccacgaggcagagggt
gaggagacgccagaggtggaccgcaagaatggcgccccggcacacctgcccaagatcggg
gatatcaagaagggctcgcgatactccatccctgacctggcggtggatgttgagcaggtg
atgggcctggagaaggccagcaagaaggccaaagccaacacggtggggggaagaaacaag
ctcaagaagatctttgacaagacgctcaccagcatcctgcccccaaaaccatacaacgac
gtgggtgtgggccagtcgcaggacgacagcatcgtgggcctgaagcagtccaaacagatt
ccggccgcgctgccagtcagcggcagcctgtcgtccagcaaccctgacctgctgcagtcc
caccaccgcatcctggacttcaacaacccgcctgacatgtcagaccaggtgctgcgggtg
ttcaaggcagaccagcaaagtcgatacatcatgatcggtaaggacaccacggccaaagag
gtggtggcccaggccatccgggagttcgccctgaccgcagcacccgaagcctattcgctg
tgtgaggtgtccatcacaccggaaggcgtcatcaagcaacgccggctcccggagcaactg
tccaagctggcagacaggatacagctcagtggcagatactacctgaagagcaacatggag
acagagaccctctgttcagacgaggacgcccaggacctccttcgtgaaggccagatctcc
ctcctccagctgtccactatggaagtagccacgcagctctccatgcgtgcctttgaactc
ttctgcgccatcgagcccaccgagtacatcgacgacctgttcaagctcaagtccaagacg
ggctcgttttgcctcaagcgcttcgaggagatcatcaaccaagaaaccttctgggtggcg
tcggaggtgacccgggagcccaaccagctcaagcgcatgaagacggtcaagcatttcatc
aagatagctctccattgtagagagtgcaagaacttcaactccatgttctccatcattagt
ggtctgaacctggccccagtatctagactccggggcacgtgggagaagctgcccagtaag
tacgagaagctgttcggggacctgcaagacctgtttgatccatccaggaacatggccaag
tatcgcaacgtgctcaacaaccagaacctccagccacccatcatccccctgttccccgtc
atcaagaaggacctcaccttcctgcacgaagggaatgactctaaagtggatggcctggtg
aactttgagaagctgcggatgatcgccaaagagatccgccacgtgggccgcatggcctcc
gtcaacatggacccagcgctcatgttcagaaccaggaagaagaaatggaggagtttaggt
tcacttagccagggcagtgccaatgcggcggtgctagacgtcacccagacgggcgggcac
aagaagcgggtgaggcgcagttccttcctgaacgccaagaagctgtatgaggatgcccaa
atggcccgcagggtcaagcaggtttgtccaaacctcagcctggagaccaacgaagaggcg
ctgcagaccctctcgctgcagtgtgagccctccatcaacacactgcccaagaatgctggt
ggcagtaaagaggccagancacggtctccggtggtgtccagggctgccagccagcagagg
agccatctgcagaagggcaaccaggccctccaggtgcccgccgtagccctctacccctca
cgcaagaagntacccgtcaaggacctgccaccattcggcacgagttcccctcagtcgttg
aagaagatcctgtcactgtcagaggaggccagcgagcgtcacaagcgtcagactgaggac
actgtatccaacaccacctcgcagctctcctccccgcccacctcaccacagagctcgccc
aagaagggtaagctaataatcccatcagctacccccagaacaggagatgcctactcagac
tcaggtcacagcgagatctcatcgcgctccagcctggtcagcaactcttcctttgacatg
gcccaggaggaaaggagggggctcaggcactccggaggggtgggagacccccacgctgga
ggggtgcgtctggagaggagggctacgacagacccggaccagtacagcctcggttcctac
tcgtccatgcaggactgccggggtctgtatacctgtgccacggtgctatctcccagctct
gaagagctgacccaggaccaaggggaccgtgtctccctggatgctgcagacagtggccgc
ggctcctggacctcgtgctcctcgggctcccacgacaacatccagaccatgcagcaggga
cgcagctgggagaccctggccttcgggccgggtggtgtggtcagcatgggtgtccatcct
cccgggggcctgaagcgttataggggtccccttggactgtgggcatctcaggctagaggg
agctgggcatcggcctcttcttcatcttcctctgcagcgtactggggcgaggactcagag
ggtgacactggcacgattaaacgccgaggcgggaaagacgtgaacgctgacccagagacg
agtagtatcacgtccatggggtctgacgaggccaagcagcacggaaggccatcgcccatc
accgccggcaacaagggtcttatcacacgaaaggagagccggtaccgcgagccccctccc
accccgccaggctacaccgccctgacaatctctgacttcagtgagggccagacgcagtcg
ccacccccgcccacggccccgtcccactctggccgccgcccacccgactactccacggcc
ctgcagcgctcgcgcatggtcacccagtcgcccgactcccagcatcaccaccagtcccaa
caacacccaggttccggaaccacaaagcgccatgggctccaccgcacccgatcgccagcg
aggatgaagagccggaggaggaaagaggaggatgaacaggtatcagcagtctga
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integrated database retrieval system
