Salmo trutta (river trout): 115170706
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Entry
115170706 CDS
T08542
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115170706
04020 Calcium signaling pathway
115170706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115170706
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115170706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115170706
NCBI-ProteinID:
XP_029582801
Ensembl:
ENSSTUG00000016727
LinkDB
All DBs
Position
32:complement(27545860..27731290)
Genome browser
AA seq
2505 aa
AA seq
DB search
MARFENEMPSRYGGGHGPGHGHGPGGPGRGGSRQGGPPGGPGGQRVYKQSMAQRARTMAL
YNPIPVRQNCFTVNRSLFIFSEDNFVRKYAKKITEWPPFEWLILATICANCIVLALEQHL
PDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKNSYIRNGWNAMDFVVVCTGI
LSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFA
IIGLEFYMGKFHTTCFDIHTDEIREEFPCGTEAPSRLCPNGTTCRKYWLGPNYGITQFDN
ILFAVLTVFQCITMEGWTDLLYYSNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSGEF
AKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILADDEDPDAFDGTRRRPTIK
NHKNKTDLLNPEDGNGDLAVGSPFARASLKSSKLEGSNFHKRERRLRFFIRRIVKTQYFY
WSVLCLVGLNTMCVAVVHYDQPEPLSDFLYFAEFVFLSIFMSEMGIKIYGLGSQPYFHSS
FNCFDCIVICGSIFEVLWGFIQPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNS
MKSIISLLFLLFLFIVVFALLGMQLFGGQFNFESGTPPTNFDTFPAAIMTVFQILTGEDW
NMVMYDGIESQGGVNNGMVFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKEEEAA
SKKNALQKAKEVAEVSPQSAANLSIAAEKVNSTGHNASDPFLDCKEQQKNNKGGNKSVWE
QRTKELRKQTLMTSREALYNELDPEDRWKVNYSRHIRPDMKTHTDRPLVVDPQENRNNNT
NKTTKEPDPRLSQQHADKLLRKQTHVHERGGGGGGGGDSGSGSGPGRPYERADSTESRRS
RKESKEHQELQHHHSSHTRLDATMLGQSGEERPQRRHHHPRVQAGSSEHRKPRQHRIASE
DVEGGGGGGGGGGGGERRHKSRGTEGEGEGEQEGGDGGERRQRRHRHGTQSGCDGEGRRT
RPHRRKDGPNLSTTRPIQKSLCRQDSQYSEDMDNVMNSKLATSQPQLPPGSTQQPCPASG
LPSPANHTTPGPGFGPAGLNTHLTNSSSHLGPDGSLVPAYGSSTRIPDHTAVDIPPMFPS
HNAILQVNKNANTEPLPKKEDKDDDDDEKGDEDGPKPMPPYSSMFILSTTNPFRKLCHYI
VTLKFFEFGILSTIAMSSIALAAEDPVWPESPRNNVLRYFDYVFTGVFTFEMLIKMVDLG
LVLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRL
PKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFERDCRGE
YLVYERNNEVKAQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGP
SPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERGCIDFAI
NAKPLTRHMPKNKQSFQYRMWEFVVSPPFEYTIMAMIALNTIVLMMKYDGASPAYEAVLA
NLNIVFTSLFSMECVLKIIAFGVLNYFKDAWNIFDCVTVLGSITDILVTELGNNFINLSF
LRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIGMLFFIYAIIGMQLFGNIGM
EEEEGSAINEHNNFRTFFQALMLLFRSATGEAWHDIMLSCLGGKLCDPLAGNTEPECGSQ
FAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDQAACG
RIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVADDNSVHFNSTLMALIRTAL
DIKIAKGGVDKHQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEY
YRQSKAKRSQARLEAEQSRTTLLFQRVEPPSPIQDGPLSLPPTHPADPGGWVVAPQGGVP
ESQSWVTVRAQEMSQRVGSWSPEGQHSEDGLDSRHNSQTVEMREMGRDGYSDTEHFLPME
GHGRAASMPRLPGDNQLRRKGRQRGNNLSTITDNSPMKRSASSLGHSRSGRGQRERGGAD
DYAMEYVIPEEGGAPRHSHRRRDRSHRASERSLCRYTDADTGLGTDLSTTTQSGELPPKE
KDRDRDRDRGRQKDRKHHHHHHHHHSGSVDKERYTPDRADRGGEHGGHRQPRGDRDHDRD
REHDRRWSRSPSEGRECMTHRQGSSSVSESPAPSTSGTSTPRRGRRQLPQTPATPRPHVT
YSPVVRKAMATPPGAQPLGRNPAPAPRRFSPEPPQGPPPPHHGSPNQACHPPPRWGDGGG
GGGGGGGESGSLEGDGCFYNQDYQDYDREHHKPPPYEQSPTQGNPHKPHPLNHPTLPLQN
HPPTPQQQHPINPHPNNPHPNNPHSRTSPRTSRHAPPPNTTPTPQGQQPPLPRRLPNGYR
ASSPSSQHHHGPTHPGPHKVPPPQPRGPRTKGLHEPYNNTDDNRC
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcgaaaacgagatgccgtccaggtatggcggcggccatggaccagggcat
gggcatggacctggaggccctggccgcggcggcagccggcagggcggcccgcctggaggc
cccgggggccagcgggtctacaagcagtccatggcgcagagagcccggaccatggccctg
tacaaccccatcccggttcgtcagaactgcttcaccgtcaaccgctcgctgttcatcttc
agcgaggacaactttgtgagaaaatacgccaaaaagattacagaatggcctccgtttgag
tggttgatcctggccaccatctgtgccaactgtatcgtcctggctctggagcaacatctg
cctgatggagacaagactcctctgtctgaacgcctggatgacactgagccctacttcata
gggatcttctgttttgagtcaggcattaagatcctggctctaggatttgccttccataag
aactcctacataaggaacggatggaatgccatggacttcgtagtagtatgcacagggatc
ctgtctacagtgggatcggacttcgatttgcggactctgagagcggtccgtgtgctgaga
cccctcaaactggtgtctgggatacccagcctccaggtggtcctcaagtccatcatgaag
gctatgatcccactgctgcagatcggcctgttgctattcttcgccatcctcatgttcgct
atcatcggcctggagttctacatgggcaaattccatactacctgcttcgacattcacaca
gatgagattcgcgaggagtttccgtgtgggaccgaagccccgtcgagactatgtccaaac
gggaccacgtgtcgaaagtattggctggggcctaactacggcatcacccagtttgacaac
atcctgtttgccgtgctcacagtcttccaatgtattaccatggagggatggactgacctg
ctctactatagcaacgatgcctcagggagtgcgtggaactggatgtacttcattcccctc
atcatcatcggctctttcttcatgttgaacctggtcctgggtgtactgtctggggagttt
gccaaagagagagagcgagtggagaacaggagtgagtttctgaagctgaggagacagcag
cagatagagagagagctcaatggatacctggagtggatttgtaaagcagaagaagtgatc
ttagcagacgatgaagaccctgatgcctttgacggcacccgcaggagacccaccattaaa
aaccacaagaacaaaacagatctccttaacccagaggatgggaatggagacctggcagtg
ggttctccctttgcgcgggccagtctgaagagttcaaagctggagggctctaacttccat
aagagggagcgtcgtctgcgtttcttcatccgacgcattgtgaagacccagtatttctac
tggagtgtactgtgtctggtgggacttaacaccatgtgtgtggctgtagtacactacgac
cagcctgaaccactctcagacttcctctactttgcagagttcgtcttcttgagtatcttc
atgtctgagatgggtataaagatttatggactggggtcacagccttactttcactcctcc
tttaactgctttgactgcattgtaatatgtggcagcatattcgaggtgctgtggggtttt
atccagcctgggacatcctttggtatcagtgtgttacgagctctaaggttactgagaatc
ttcaaagtcaccaagtactgggcgtctttgaggaacctggttgtatctctgctcaactcc
atgaaatccattataagcctgctcttcctcctcttcctctttatcgtcgtcttcgctctg
ttgggcatgcaactcttcggaggacagtttaattttgaatctggcactcccccgaccaac
tttgatactttccctgcagcaataatgactgtgttccagatcctgaccggagaagactgg
aacatggttatgtatgatggaatagagtctcagggaggagtcaacaacggaatggtcttc
tcagtcttcttcatcgtgctcacacttttcggcaactacactctgctgaatgtgttcttg
gccattgctgtggataatctggccaatgcacaggaactcactaaggaagaggaagccgct
tccaagaaaaatgctttacaaaaagccaaggaggtggccgaagtcagccctcagtctgca
gccaacctgtccatagcggccgagaaagtaaacagcacaggtcacaacgcttccgacccc
tttctggactgtaaggagcagcagaagaacaataagggtggtaataagtctgtgtgggaa
cagaggaccaaggagctgaggaaacagactctaatgaccagcagagaggccctctacaac
gaactggacccagaggaccgctggaaggtgaactactcccgccacatccgtcctgacatg
aagacccatacagaccgccctctagtggtggacccccaggagaaccgcaacaacaacacc
aacaagaccaccaaagagcctgacccccgcctcagccagcagcacgccgacaagctgctc
cgcaagcagacacacgtccacgagagaggaggtgggggaggaggaggtggggactcaggg
tctggttcaggccctggaaggccctacgagcgggcagactctacggagagccgcaggagc
cgtaaggagagcaaggagcaccaggagctccaacaccaccactcctcccatacccgccta
gatgcaacgatgctgggacagagtggagaggagaggccccagagaaggcaccaccaccca
cgggtccaggcgggctcatcggagcacaggaaaccccgccagcaccgcattgcctcagag
gacgtagaggggggaggtggaggtggtggaggagggggaggtggggaaaggcggcacaag
agcagggggacagaaggagaaggcgagggggagcaagaggggggtgatggaggtgagagg
aggcagagacggcatcgccatggcactcagtcggggtgtgatggtgaggggaggaggacg
cggccacaccgcaggaaggatggtcccaacctgtccaccacacggcccatccagaagagc
ctctgtagacaggacagccagtacagcgaggacatggacaatgtcatgaacagtaaactg
gccaccagccagccccagctacccccaggctctacccagcagccctgcccagcctcgggc
ctccccagcccagccaaccacactactccaggcccaggcttcggccctgcaggcctcaac
actcacctgaccaacagcagctcccacctgggcccagatggaagcctggttcctgcatac
ggaagtagcacccggataccggaccacacagcagtggacataccacccatgtttccttcc
cacaacgccatattgcaggtcaataagaatgctaacacggagcctctgcctaagaaggag
gataaggatgatgatgatgatgagaagggtgatgaagatggacccaaaccaatgcctccc
tatagctccatgttcatcctctctaccaccaacccgttccggaaactatgccactacatt
gtgactctgaaattctttgagtttggtatcctgtctaccatcgctatgagcagtatcgcc
ctggcagcagaagatcccgtctggccagaatcacctcgcaacaatgttctgcgctacttt
gactatgtgtttacgggagtgttcacctttgagatgttgattaagatggtggatctgggc
ctggtgttgcaccagggctcctatttccgtgacctgtggaacatcctggactttatagtg
gttagtggtgctctggtggccttcgccttcacggggagcagtaaagggaaagacatcagc
acaatcaagtctctgagggttctgagagtgttgcgacctctgaagactatcaagcgtctt
ccaaagctcaaggctgtgtttgactgtgtggtcaactccctgaagaacgtcctgaacatc
ctcatcgtctacatgctcttcatgtttatatttgctgtggtggctgtgcagctgttcaaa
ggaagattcttctactgcactgacgagtccaaggagtttgagcgcgactgcaggggcgaa
tatctagtctatgagcggaataatgaagtgaaggcgcagaagcgggagtggaagaagtac
gatttccactacgacaacgtgctttgggccctgctcaccctcttcaccgtgtctaccgga
gaggggtggccgcaggtgctgaaacattcagtggatgcgacctatgagaatcagggcccg
agcccggggtaccggatggagatgtccatcttttacgtggtgtacttcgtggtcttcccc
ttcttcttcgtcaatatcttcgtagctctcatcatcatcactttccaggagcaaggagac
aagatgatggaggattacagtttagagaaaaacgagagaggctgcatagacttcgccatt
aatgccaaaccgttgacgcgacacatgcctaagaacaagcaaagcttccagtatcgcatg
tgggagtttgtggtgtcgccgccattcgagtatacaatcatggctatgatcgcgctcaat
actatcgtactgatgatgaagtatgacggagcctctccggcctacgaggctgtgctggcc
aacctgaacatcgtgttcacctcgctgttctccatggagtgtgtgctcaagatcatcgcc
tttggagtgctgaattacttcaaagatgcctggaacatttttgactgtgtgacagtcctg
ggcagcattacagatattttagtgactgagctcgggaataacttcatcaacttgagtttc
ctgagactgttcagggctgccaggctcatcaaactgctccggcagggagagaccatccgc
atcctgctctggacctttgttcaatccttcaaggcgctgccgtacgtgtgcctgcttatt
ggcatgctgttcttcatctatgccatcatcgggatgcagctgtttgggaacattgggatg
gaggaggaggaggggagcgccatcaacgaacacaacaacttcaggactttcttccaagct
ctcatgctgctcttcaggagtgccacgggcgaggcgtggcatgacatcatgctgtcgtgt
cttggagggaagctctgtgatcctctggcagggaacactgaaccagagtgtggcagccag
tttgcctacctctactttgtgtccttcatcttcttctgctccttcctgatgctgaatctg
ttcgtggctgtcatcatggacaactttgagtacctgaccagagactcctccatcctcggc
ccacatcatctagacgagtatgtcaggatatgggctgaatatgaccaagcagcttgcggt
cgcattcattataaggatatgtacagtttattgcgagttatcgacccgcctcttggctta
ggaaagaaatgcccccatagagtggcctgcaagaggctgctgcggatggacctcccggtc
gccgacgacaactcagtacacttcaactccaccctgatggccctgatccgcacggcgctg
gacatcaagatcgccaagggaggtgtggacaaacaccagatggatgcagagctgaggaaa
gagatgatggcgatttggcccaatctctcccagaagaccctggacctcttagtcacgcca
cataagtcaacagacctgacggtggggaagatctacgctgccatgatgatcatggagtac
tacaggcagagcaaggccaagcgctctcaggcgcggctagaggcggagcagagtcgaacg
acattactgtttcagcgcgtggagccgccctcccccatccaggacgggcctctcagcctc
cctcctacccatccggcagaccccggaggatgggtagtggctccacaggggggggttcca
gagagccagtcgtgggtgacagtgcgggctcaggagatgtcccagagagtaggcagctgg
agtcctgagggacagcactctgaggatggcctggacagcaggcataactcgcagacggta
gagatgagagagatggggcgtgatggttactcggataccgagcactttctgccaatggaa
ggccacggaagggccgcttccatgccacgccttccaggcgacaaccaactgcgaaggaaa
gggaggcagcgtggaaataacctcagtactataacagataatagtcctatgaagcgctcg
gcctcctcccttggtcacagtcgatctgggaggggccagagggaaaggggaggggccgat
gattatgcaatggagtatgtcatccccgaggagggcggagcaccgaggcacagccaccga
cgccgcgaccgaagccaccgggcctctgagcggtcactgtgtcgatatacagacgcagat
acaggactgggcacagacttgagcaccaccactcagtcaggtgagctgccacccaaagag
aaggaccgtgaccgcgacagagaccgcggtcggcagaaagaccgcaaacaccaccaccat
caccaccaccatcacagcggctctgtggacaaggagcgctacacaccagaccgcgccgac
cgggggggagagcacggtggccacagacagccccgaggagacagagaccacgaccgggat
agggagcacgaccgtcgctggtcacggtcacccagcgagggcagagagtgcatgacacac
agacagggcagtagttcggtgagcgaaagtcccgctccctctacctcggggaccagtacc
ccgagacgaggccgtcggcaactccctcagaccccggcaacgccccgcccacacgtcacc
tactctcctgtcgtccgtaaagccatggccacacctcccggagcccagcccctggggcgc
aatcccgcccccgcccctcgccgcttttcccctgagcccccccagggacctcccccgccc
caccatggctcacccaaccaagcctgccacccccctccccgctggggggatgggggagga
ggaggaggaggaggaggaggagagagtgggtcgctggagggcgacggctgcttctacaac
caggactaccaggattacgaccgtgagcaccacaaaccgcctccctatgagcagagcccc
acacagggcaaccctcacaagcctcaccccctcaaccaccctactctccccctgcaaaac
catcccccaaccccacagcagcagcaccctatcaacccgcacccaaacaacccacacccc
aacaacccccactcccgcacctcgcccaggacttcccgccacgcgcccccacccaacacc
acccccaccccccaagggcagcagcctcctctccctcgacgcctccccaacgggtaccgc
gcctcctccccctcctcgcaacaccaccacggccccacccaccccgggccccacaaggtc
ccccctccccagcctagagggccccgcacgaaaggcctgcacgaaccctacaacaacacg
gatgacaacaggtgctag
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integrated database retrieval system
