Salmo trutta (river trout): 115170895
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Entry
115170895 CDS
T08542
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115170895
Membrane trafficking [BR:
stru04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
115170895
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
V-set
LRR_9
LRRNT
LRR_Zer-1
Big_6
Receptor_2B4
LRR_6
Motif
Other DBs
NCBI-GeneID:
115170895
NCBI-ProteinID:
XP_029583116
Ensembl:
ENSSTUG00000034630
LinkDB
All DBs
Position
3:24757378..25060890
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AA seq
614 aa
AA seq
DB search
MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPLGVFTGLSNLTRLDVSDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLQTLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLQAYSFKKLFWLRHLEI
DSWTSLDSVPANTLHSLNLTTLFITNTNLSTFPYQALKHLHYLTHLNLSFNRIRHIEGGM
LFELVRLREFHLVGAQLSTIEPDAFQGLRWLKVLNVSHNHLDTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQKRHSIFFGDSQPECNTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQSAKLHCSAEGIPRPVVSWLSPRRRLLTNKSYGRVKVHNNGTLEIKV
AEVQDGGVYLCMATNTAGNDSLMASLAVKSLGSLYANRTQYYTDPSNATTNGTSNVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSVDGGA
EGQAGPHRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagcaaagtcatgctgcacacagccctctcatgctggcaaccattc
ctgggactggctctagtggccgtctttgtgggttctgccttgggatgtcccgcccgctgt
gactgctcagcccagagcaagtcggtcctgtgccaccgcaaacgcctaccgagcatccca
gacggcatccccatcgagaccaggattctggacctgagcaagaacaagctgcaggccgtc
aacccggacgactttgccccctaccctggactagaggatctggacctcagtgggaacatt
atcagctatgtggagccgggggccttcaaccctctgtacagcatgcactcgctcagtctc
aaaagcaaccgcatcaagcttattcccctgggagtcttcacaggcttgtccaacctcaca
cggctggatgtcagcgacaacaagatcgtcatcctgctggactacatgttccaggacttg
cacaacctgaagttcctggaggtgggtgacaatgacctggtatacatctcccaccgggcc
ttcagtggactgctgagcctacagacactaaccctggagagatgcaacctgacagtggtg
cccactgaggccctgtcccatctgcacaacttggtcagacttcacctccgatacctcagc
atcagcaccttgcaagcctactccttcaagaaacttttctggctgcgccacctggagatt
gacagctggacctcgctggacagtgtgcctgccaacacgctgcacagcctcaacctgacc
acgcttttcatcaccaacactaacctgtccaccttcccataccaggccctaaagcacctg
cactacctaacacacctcaacctgtccttcaaccgcatcagacacatcgaggggggaatg
ctgtttgagttggtgcgcctgagggaatttcatctagttggggcccagttgtcgaccatt
gaaccggacgcatttcagggcctccggtggctcaaagtcctcaacgtctcccacaaccat
ttggacaccctggagaagggtgtcttccaagcccctgaggcactggaggtcctcttgatt
gacgacaaccccctggtgtgcgactgtcgcctcatgtggatcctgcagaaaaggcactcc
atcttctttggcgactcgcagccggagtgcaacacccctgagggtatccgcggcaggcct
ttcagggaattcaaggagaccctgctatcctattacgtgacatgcaccaagccaaaaatc
agagagaacaagacacagacgatagcagtggatgagggccagtcagcgaaactacactgc
agtgctgaagggatccccaggccggtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaagagctatggtagagtcaaggtccacaacaatgggacgctggagatcaaggtg
gccgaggtgcaggacggtggcgtgtacctttgcatggcaaccaacacggcgggtaacgac
tcattgatggcctccctagcagtgaaaagcctggggtcgctctacgcaaacaggacccag
tactacacagatcccagcaacgccactaccaatgggactagcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggatgtttcacattcctgggggtggtc
ttgttctgctttctgctactgttcgtttggagccggggcaagggaaagcataaaaacaac
atagatattgaatatgtccctcgttccaagtctaatggcacctctgtagatggaggggca
gagggacaagctggacctcatcgctttaacatgaaaatgatctaa
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