Salmo trutta (river trout): 115170901
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Entry
115170901 CDS
T08542
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00310
Lysine degradation
stru00514
Other types of O-glycan biosynthesis
stru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115170901
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115170901
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115170901
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115170901
Glycosyltransferases [BR:
stru01003
]
O-Glycan biosynthesis
O-linked Gal type
115170901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
115170901
NCBI-ProteinID:
XP_029583126
Ensembl:
ENSSTUG00000014718
LinkDB
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Position
32:complement(5934456..5958089)
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AA seq
609 aa
AA seq
DB search
MHGYNLLLSTALTILFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGNI
ERLNYPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSARNMWADYFMVADCDNLLTNPNVLWKLIKEKKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSARMADVQMFLCNRETYGYFPVPLRAHNSLTDEAESFLHSLLE
VNVRNPHVLPSEYIPAPIKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEQFEERNLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggtacaacttacttctgtccaccgccctgacgatactgttctccggaccagct
caaggatacttccccgaagagcgctggagccccgaatctccacttcttgccccgcgggtc
ctcattgccctcgtctgccgcaactctgaacattctctgccttatttccttggaaatatc
gaacgtctgaattatcccaaggaccgcgtggcaatttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagtccgaagcag
tggaccaacctccgctatgcacacgtgatgaagctacggcaggcagcactggactccgca
agaaacatgtgggcagactacttcatggtggcggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaagaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgacgacatcattgtcttcgctttctccgctcgc
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccccgtgcca
ctgcgagctcacaactccctgacagacgaagcggagagcttcttacattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagtacatcccggcccccataaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggacagaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgatccgtatcacggcaggcccctcactaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccgccctgagaagtccgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctcccggtcatgttcaataagcaccctgtc
tcggactacatggagcagtttgaggagcgaaacctgaaggccttctcagccgagcctctg
ctagtgttccccactcactacacaggagacgcgggctacatcagcgacaccgagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagaca
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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