Salmo trutta (river trout): 115170946
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Entry
115170946 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130-like isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115170946
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115170946
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115170946
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115170946
NCBI-ProteinID:
XP_029583220
Ensembl:
ENSSTUG00000034687
LinkDB
All DBs
Position
3:25229088..25301982
Genome browser
AA seq
439 aa
AA seq
DB search
MPKRWTTATPCSYLPVVLLVLVLPRCILSIRADKTISKEDHVSATVNATVLDSKGNPKQI
LTKDDGMYGQNSPKVDAKGIVIAPAPNHGVVDRQGCNPHTRFVVPPRTGHWVALLQRGNC
TFKEKILKASAFNASAVLIYNNNSNEDTVKMGHEGTGDTVAVMITESYGKEILGLLERNL
TVLVSVVVGQHGQAKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRFTSARDRSQVG
HRRRLGDAAKKAIGKLTTRTVKKGDKETDPDFNHCAVCIEGYQLNDVVRILPCKHVFHKL
CVDPWLNEHCTCPMCKLNILKALGIMPNLPCVDNVGFDMDHRIGRSQTMASQRTALVDLS
SETSISLEPLQQGHPGTGPQIPSESGELTPRTGEINIAVTKEWFIIASFGLLSTLTLCFM
IIKATARFSSPDLEWEKRR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggtggaccacagcaacgccatgcagctatctcccggtcgtcttgttggtg
ctcgttctgcccagatgtatactgtcgatccgtgccgacaaaaccatcagcaaggaagac
catgttagtgctacggtcaatgccaccgtacttgactccaaaggcaatcctaagcaaatt
ctaaccaaggacgatggcatgtacggccagaattcaccgaaagtggacgcgaaaggaatc
gtgattgcacctgcaccgaatcatggagtggtggaccgccagggctgcaacccccacact
cgcttcgtggtgcctcctcggacggggcactgggtggccctactgcagcgcggcaactgc
accttcaaggagaagatcctcaaggcctcggccttcaacgcctcagccgtgctcatctac
aacaacaactccaatgaggacaccgtcaagatgggccacgaaggtacaggcgacacggtg
gcagtgatgatcaccgagtcttacggcaaggagatcctgggtctgctggagaggaacctg
acggtgctggtgagtgtggtggtgggccaacacggccaggccaagaacatcaaccgcggc
tccctggtcttcgtctccatctccttcatcgtactcatgatcatctcctctgcctggctc
atcttctacttcatccagaagatccgctttacgagcgcacgtgaccgcagccaggtagga
catagacgtcgacttggagatgcagctaagaaagccatagggaagctgacaaccaggaca
gtgaagaaaggggacaaggaaacagacccggacttcaaccactgcgccgtgtgcatcgag
ggataccagctcaacgacgtggtccgtatcctgccctgcaaacatgtcttccataagctg
tgtgtggacccctggctgaatgagcactgtacttgtcccatgtgtaaactgaacatcctc
aaagctctgggcatcatgcccaacctgccgtgcgtggacaacgtcggcttcgacatggac
cacaggatagggcgcagccagacgatggctagccagcggacagccctggtggacctgtcc
agtgagacatccatcagcctagagcccctgcagcaaggccaccccggcactggaccccag
atcccctcagagagcggagagctcaccccccgcaccggagagatcaacatcgccgtcacc
aaggagtggtttataatcgccagcttcggccttctcagcactctcactctgtgctttatg
atcatcaaggccacagccaggttctccagccctgacctggagtgggagaagagaagatga
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integrated database retrieval system
