Salmo trutta (river trout): 115170975
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Entry
115170975 CDS
T08542
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00603
Glycosphingolipid biosynthesis - globo and isoglobo series
stru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
115170975
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115170975
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
115170975
Glycosyltransferases [BR:
stru01003
]
Glycan extension
FORS blood group (Forssman antigen)
115170975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
115170975
NCBI-ProteinID:
XP_029583252
Ensembl:
ENSSTUG00000041752
LinkDB
All DBs
Position
32:complement(8279633..8299167)
Genome browser
AA seq
351 aa
AA seq
DB search
MRFSSNVKPYVLLLIVGIFLLLGYVYFSFFSERLNRDILIDEDQKRTNLSQLVFKSRVRN
LVSPEKLLYKQPSVLVGRTDVVSVTPWLAPIVWEGTYDPVLIDNIYKPMKLTIATTVFAV
GKYVRFLQDFLETAEKHFMVGFNVHYYVFTDRPDDVPSVNLTQGRHLSVIQVPVSNRWQE
ISARRMEIIQTTIERQIRREADYIFCLDVDSKFHARWGSESLGRLVAVIHPGYYEQTRDH
FPYERRPASTAYIPMDEGDYYYGGAMFGGFVEDVYTLTKVCRKRFEEDAGNSIEAAWQEE
SHLNRYLLYNKPSKVLSPEYLWQDFKAQTKEVKVIRFSGVIKNYAEVRPNV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttagttcaaatgtcaagccatatgttctgcttctcattgttggaatattcttg
cttctggggtatgtctacttcagcttcttctctgaaagactcaacagagatatcctaatt
gatgaggaccagaagagaaccaacctgagtcaactcgtgttcaagagcagagtacggaac
ttggtctctcctgaaaagctattgtacaagcagcccagtgtcttggtgggacgtactgat
gtggtgtcagtgaccccatggttggcacccatcgtctgggaaggcacctatgaccctgtg
ctaatcgacaacatctacaagcccatgaagctcaccatagcaaccactgtgtttgctgtt
ggaaaatacgtcaggtttctccaagattttctggagacagcagagaagcacttcatggtc
ggcttcaacgtgcactactacgttttcactgatcgtcccgacgatgttccttcagtgaac
ctgactcaggggagacatttgagtgtgatccaggtcccggtttcaaaccgctggcaggag
atatcagcccggaggatggagatcatccagaccaccatcgaacgtcagatcagaagggag
gccgactacatcttctgtctggacgtggacagcaagttccacgctcgctgggggtccgag
tctcttggaaggctggttgctgttatacacccaggctactacgagcagacgcgtgaccac
ttcccgtacgaacggcgtccagcctcgactgcctacatccccatggatgagggagactac
tactatggcggggctatgttcggagggttcgtggaggatgtgtacacactaacaaaggta
tgtcggaaacggtttgaggaggatgcggggaattccatcgaggctgcctggcaggaggag
agtcacctcaacaggtacctgctctacaacaagcccagcaaggtgttgtctccagaatac
ctgtggcaggacttcaaggcccaaaccaaagaggtcaaagtcattcgcttctcaggggtc
attaaaaactatgctgaagttcgtcccaatgtataa
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