Salmo trutta (river trout): 115171068
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Entry
115171068 CDS
T08542
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1-like isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115171068
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115171068
04261 Adrenergic signaling in cardiomyocytes
115171068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115171068
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115171068
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
115171068
NCBI-ProteinID:
XP_029583413
Ensembl:
ENSSTUG00000024708
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Position
32:complement(11421460..11458838)
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AA seq
680 aa
AA seq
DB search
MVQKSSMSRTPSTSTQEIQMDMFDQHPHAQGKYSKRKSRFKRSDGSTSSDTTSNSFVRQG
SADSYTSRPSDSDVSLEEDPEALRKEADLQALATLEKAKTKPVAFAVRTNVGYNSGPNDD
VPVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENTRLLQEQKMRQ
NRLSSSKSGGSSSLDVATGTRRPTPPGTAHVDMSTMAFDLDPLDLDAEEPPEPQGDPRSP
KGSAGSVTSPQGQIHRLPFFKKMEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFD
FLKHKFEGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLDVLAEVQSEIERIFE
LARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRLIKSRGKSQAKHLNVQM
VAADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPPSSNPPNPLLNRTMATA
ALAASPEPVSNLQGPYLVHGEQKREGPLSECGGSGSLHDYQSDQGGKQQPQQHQQQKQQT
YLHSSRGQLRAGGGRGLSRQDTFDSETQGSRDSAYTEAGDSCMDIETDPYEESEMYRGVG
GGGSRLHLAQHHGRQASWEDEGAEPDQENLNHPPMPSHTQPGQHGRAKLRERYCQEPGDT
GANMGRNKNQEDWGRDVYIR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaaaagtagtatgtccaggacgccttcgacctcaacccaggagatccaaatg
gacatgtttgatcaacatccacacgcacagggaaagtattccaaacggaagagccgcttc
aagcgctccgatggaagcacctcctctgacaccacctccaacagctttgtccggcagggc
tctgccgactcctacaccagccggccgtcggactcagatgtgtccctggaggaggaccca
gaggcgctgcggaaggaggcagacctacaggccctcgccaccctcgagaaagccaagacc
aaaccagtagccttcgctgtgcggacgaatgtgggctacaactctgggcccaacgacgac
gtcccagtgcagggcatggccatctcctttgaagccaaagacttcctacacatcaaagag
aagtacaataatgactggtggattgggcgtctggtgaaggagggctgtgaggtggggttc
atacccagcccagtcaaactggagaacacccggctactgcaggagcagaagatgagacag
aaccgcctcagctccagtaaatctggtggcagctccagcctggacgttgccacgggaaca
cgcaggcccaccccacctggcacagctcatgtggacatgtccacgatggcttttgacctt
gaccccctggacctggatgctgaggagccccctgagccccagggtgaccctcgctccccc
aagggcagcgcaggcagcgtcacctccccccagggccaaatccaccgcctgcccttcttt
aagaagatggagcatgtccccccttacgacgtggtcccctccatgagacccatcattcta
gtggggccgtcactgaagggctacgaggtgactgacatgatgcaaaaggctctctttgac
tttctcaagcacaagtttgagggcaggatatccatcacccgggtgaccgcagacatctcc
cttgccaagcgctcggtcctcaacaaccccagtaaacacaccatcatcgagcgctccagc
acccgctccagcctggacgtactggcggaggtgcagagtgagattgagcgtatctttgag
ctggcccgcaccctgcagctggttgccctagacgcagacaccatcaaccacccctctcag
ctggctaagacctccctggctcctatcatcgtctacatcaaaatagcctcacctaaggtc
ctccagaggctcattaaatcccgggggaagtcccaggccaaacacctgaacgtgcagatg
gtggcagcagacaagctggcccagtgcccccctgagctgtttgacatcatcctggatgag
aaccagctggaggacgcctgtgagcatctggctgactacctggaggcctactggaaggcc
acgcacccccccagcagtaacccccccaaccccctcctcaaccgcaccatggccacggcc
gccctggccgcctccccagagcccgtctccaacctgcaggggccgtacctggtgcacgga
gaacagaagcgggaagggcctctgtcggagtgcggtggtagcggcagtctccatgactac
cagagtgaccagggagggaagcagcaaccacagcagcaccagcagcagaagcagcagacc
tacctgcactcctcacggggccagctacgggcagggggtgggaggggcctgtcccggcag
gacaccttcgactcggagactcagggcagtcgggactcggcctacactgaagcaggggac
tcttgcatggacattgagaccgacccctacgaggagtctgagatgtaccgcggggtaggg
ggcgggggcagccgcctccacctggcccagcaccacggccgccaggcctcctgggaagac
gagggggccgagccggaccaggagaacctcaaccaccctcccatgccctcccacacccag
cctgggcaacatggccgggccaagctaagggagaggtactgccaggaacccggggacacc
ggcgccaacatgggccgcaacaagaatcaggaggactgggggagggacgtgtacatccgc
tga
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