Salmo trutta (river trout): 115171083
Help
Entry
115171083 CDS
T08542
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03266
Virion - Herpesvirus
stru04145
Phagosome
stru04148
Efferocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115171083
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115171083
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115171083
04148 Efferocytosis
115171083
09144 Cellular community - eukaryotes
04510 Focal adhesion
115171083
09142 Cell motility
04820 Cytoskeleton in muscle cells
115171083
04810 Regulation of actin cytoskeleton
115171083
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115171083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115171083
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115171083
04515 Cell adhesion molecules [BR:
stru04515
]
115171083
04090 CD molecules [BR:
stru04090
]
115171083
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115171083
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115171083
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115171083
CD molecules [BR:
stru04090
]
Proteins
115171083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
115171083
NCBI-ProteinID:
XP_029583442
Ensembl:
ENSSTUG00000030622
LinkDB
All DBs
Position
32:complement(11864214..11880660)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTFFDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAVHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTEEGLEFPFSTLSVQKDTPLSDKASGAADDVTQIRPQKLRLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAVSNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRADASHLLVFTTDATTHIALDGRLAGLVQPNDGQCHI
NRDNNYDKSSSLDYPSLALITEKMSENNINLIFAVTNNVVPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKAEDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWTGENCNCSTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCARIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVQHFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTVHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttttttgaccgcctatggatattttcgggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacatctcgaggggtgagcacctgcagacagtgtttggct
gtccaccctagctgtgcttggtgctttaaggaagagtttggccaaggggggtccagtgtg
tcccgttgtgatctgaagcagaacctgttggatggggggtgtacggaggaggggctagag
ttccccttcagtaccctcagtgtgcagaaagacacgcccctcagtgacaaggcatcggga
gcggctgacgacgtcacccagatcagaccccagaaactccgcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactatccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagccgtcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcggtggtgtgcaaggacaag
ataggctggcgtgcggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctggacggccggcttgctggtctagtgcagcccaatgatggacagtgtcacatc
aacagagacaacaactatgacaagtcgtcaagcctggactacccctctctggctctgatc
acagagaagatgtccgagaacaacatcaacctcattttcgctgtgaccaacaatgtggtg
cccctctaccagaactacagccagctcattcccggcaccacagttggaacgctgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gagctggagttgctgggtgttccagaggagctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccggacttaagatcggagacacggtg
tcgttcagtgtggaggccaggttacgcggctgccctaaggagaagaaccgtaccttcacc
attaaacctgtgggcttcaaagacgccctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgaaagtcctctctgtaaccagggaaatgggacttac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgctgtgaatgtgctgac
ggggactacaggccctcagaccagggcaactgcagccccaaagctgaggaccccatctgc
agtgggagaggcaactgtgtgtgtggccagtgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgagtgtgacgacttcaactgccttcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggacgggg
gagaactgtaactgttccacccggacagacacctgcatgtccagtatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcactttaagagaggccgtctctttgaggagaaaagctgtgcccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtacagcacttccagtactatgaggatgccagtgga
aagtccatcctatatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgcttatctggaag
ctgctggtcaccgttcatgaccgccgagagttcgccaagtttgaggaggagagggctaag
gccaaatgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaattcttga
DBGET
integrated database retrieval system