KEGG   Salmo trutta (river trout): 115171112
Entry
115171112         CDS       T08542                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
stru  Salmo trutta (river trout)
Pathway
stru04137  Mitophagy - animal
stru04144  Endocytosis
stru04145  Phagosome
stru04148  Efferocytosis
stru05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115171112
   04145 Phagosome
    115171112
   04137 Mitophagy - animal
    115171112
   04148 Efferocytosis
    115171112
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115171112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115171112
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115171112
   04031 GTP-binding proteins [BR:stru04031]
    115171112
Membrane trafficking [BR:stru04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115171112
 Endosome - Lysosome transport
    115171112
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115171112
  Exosomal proteins of other body fluids (saliva and urine)
   115171112
  Exosomal proteins of colorectal cancer cells
   115171112
  Exosomal proteins of bladder cancer cells
   115171112
GTP-binding proteins [BR:stru04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115171112
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 115171112
NCBI-ProteinID: XP_029583484
Ensembl: ENSSTUG00000038913
LinkDB
Position
32:complement(12581755..12600707)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGASGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacattgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccagtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa

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