Salmo trutta (river trout): 115171112
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Entry
115171112 CDS
T08542
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04144
Endocytosis
stru04145
Phagosome
stru04148
Efferocytosis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115171112
04145 Phagosome
115171112
04137 Mitophagy - animal
115171112
04148 Efferocytosis
115171112
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115171112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115171112
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115171112
04031 GTP-binding proteins [BR:
stru04031
]
115171112
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
115171112
Endosome - Lysosome transport
115171112
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115171112
Exosomal proteins of other body fluids (saliva and urine)
115171112
Exosomal proteins of colorectal cancer cells
115171112
Exosomal proteins of bladder cancer cells
115171112
GTP-binding proteins [BR:
stru04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
115171112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
115171112
NCBI-ProteinID:
XP_029583484
Ensembl:
ENSSTUG00000038913
LinkDB
All DBs
Position
32:complement(12581755..12600707)
Genome browser
AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGASGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacattgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccagtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa
DBGET
integrated database retrieval system