Salmo trutta (river trout): 115171119
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Entry
115171119 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115171119
04082 Neuroactive ligand signaling
115171119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115171119
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115171119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
115171119
NCBI-ProteinID:
XP_029583505
Ensembl:
ENSSTUG00000042105
LinkDB
All DBs
Position
3:complement(25701555..25752882)
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AA seq
473 aa
AA seq
DB search
MRVPVCVSADLIHRVHAAMRNRDYIFQCLLNCLTLTLLLQTRPVIADPTTDAFKNNITLF
TRILDRLLDGYDNRLRPGLGDRITEVNTNVYVTSFGPVSDTDMEYTIDVFFRQSWKDERL
KFDGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTV
HAECPMHLEDFPMDFHSCPLKFGSYAYTMSEVTYVWTSKAADSVVVEGESSRLNQYDLLG
QTVGQETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR
TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSW
AWDGKSIVNDKKKEKASAMKKNNAYAVAVANYAPNITKDSGLSTIAKGGASDPNMAVGKV
GGKTDPKKTFNSVSKIDRISRIMFPVLFSSFNLVYWATYLNREPHIKDMVPST
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcctgtctgtgtctccgctgatctcatacatcgtgtacatgcagctatgagg
aatagagactacatttttcaatgtctactcaactgcctcacactgacgctcctcttgcaa
acgaggccggtgattgctgatcctacaacagatgccttcaagaacaacatcactctcttc
acacggatccttgacagacttctagatggctatgataatcgtcttcgacccggccttggg
gatcgtataacagaggtgaataccaatgtctacgtcaccagctttggcccagtttcagat
acagacatggaatacacaatagacgtgttcttccggcaaagctggaaagatgagaggtta
aaattcgacgggcccatgaacatactgcggctgaacaacttgatggccagtaaaatatgg
acgccagacacgttcttccacaacgggaagaagtcagtggctcacaacatgaccatgccc
aataaactactgaggattcaagacgatggcaccctgctttacaccatgaggttgacggtt
cacgcagagtgtccgatgcatctggaggacttccccatggacttccactcatgtcccctg
aagtttggcagctatgcctatacaatgtcagaggtgacttacgtctggaccagtaaggct
gccgactctgtggtggtggaaggagagagctcccgtttgaaccagtacgacctgctcggc
caaacagtgggccaagaaaccatcaagtccagcacaggcgaatacactgtcatgacggca
catttccatttgaagcggaagattggctactttgtgatccagacctatctaccatgcatt
atgaccgtcatcctctcccaggtgtccttctggctgaacagagagtccgtgccagctagg
actgtgtttggtgtaaccactgtcctgacaatgaccaccctgagtataagtgctcgtaac
tccctccctaaggtggcctacgccacggccatggactggttcatcgctgtctgctacgcc
tttgtcttctctgcccttattgagtttgccaccgtcaactacttcacaaagcgcagctgg
gcctgggatgggaagagcattgtgaatgacaagaaaaaagagaaggcctccgccatgaag
aagaacaacgcgtatgccgtggcagtggccaactatgcgcccaacatcaccaaggactct
gggttgtccaccatcgccaagggcggcgcctctgaccccaacatggcggttggcaaggtg
ggtggcaaaacggacccaaagaagactttcaatagtgtgagcaaaatcgataggatttca
aggattatgttcccagtcctgtttagcagcttcaatttagtctactgggccacgtaccta
aacagagaaccgcatataaaggatatggtgccctcaacctag
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