Salmo trutta (river trout): 115171187
Help
Entry
115171187 CDS
T08542
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115171187
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115171187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
ig
LRR_9
Ig_2
LRR_14
fn3
LRR_Zer-1
Sp38
DHU1_N
LRR_EndoS
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
115171187
NCBI-ProteinID:
XP_029583663
Ensembl:
ENSSTUG00000005072
UniProt:
A0A673WMY7
LinkDB
All DBs
Position
1:16201877..16225293
Genome browser
AA seq
773 aa
AA seq
DB search
METLLVYVMVLGMAVKAHKVQVCPKRCVCQMLNPNLATLCDKKGLLFVPPDIDRHTVEMR
LGDNFVTSIKRRDFANMTKLQDMTLSRNTIGSISPHAFKDLENLRALHLDSNRLMRLTND
TFSGMSKLQHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESAPWVAIQRMTSLHTLG
LDHNMLSYIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSLGPTSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQRVALRCKARGDPDPIIHWIAPDGRLMSNSSRAAVHSDGTLDILISTVKDSGSFIC
VASNPAGEAQQTVDLVIAKLPHITNSTVEKEQDPGSSDIATVTRTGGGGEGGGVVPLGNT
KTSQEKKVVIAEATSTSALVRFSFQRSIPGIRMFQIQYNGTYDDSLVYRMIPPSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCIRFTTDPQYLRCHFMQSQFLGGTIVVII
GGIIVASVLAFIIFLIVRYRVCNQGDEDKALEMGEIQSLSSDGQLQGCGVPKSMSKSLSK
QILCLEKPEKVDKEYLRVGLPPPELFKQQRPPVLTTTTSTKLSIPDCQTDVELENTNRNN
SAEAKMVVSAVSTKWTKVARGPSPPGGSSRHYMTVPAGGVRVNRRHSLNMDSYKECCYFS
LVQQQQPKPGGGVRSKRSLSMSGELPQLESAMANIRRSRDKLYGSEWLLESTL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgttagtttacgtgatggtacttggcatggctgtaaaagcccacaaggtc
caggtgtgcccaaaacgctgtgtctgccagatgcttaaccccaacctagcaaccctctgc
gacaagaagggcctcctctttgtcccacccgacatcgaccgtcacaccgtggagatgcgt
ctgggcgacaacttcgttacgagcatcaaacgacgggacttcgccaacatgaccaaactg
caagacatgacattgtctcggaacaccatcggctccatctcgcctcacgcctttaaagat
ctggagaacctcagagccttgcatctggacagcaaccgtctgatgaggctcaccaacgac
accttcagtgggatgtccaagctccaacatctcattctcaacaacaaccagctgattcac
atccacatcggggccttcaatgatctcacagctctagaggagttagatctgtcctacaac
aacttagaaagcgccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagctacattcctgagggaaccttctctggcctgcagaagctc
aaacgccttgacgtcacatccaacaagctccagaagcttccgccagacccagtgttccaa
cgggccggcgtcttggccacatcagggagcttgggtccgacgtcatttgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctgtggctgaggaggctgaggagggaa
gatgatctggagacatgtgcggctccgcagcacctggctgggcgatacttctggaccgtg
tctgaagaagagttcctctgtgagccccctcttatcaccagacactcccaggagctgcga
gcgttggagggtcagagagtagctctgcgctgtaaggccaggggcgatccagaccccatc
atccactggatcgccccagacggccggctcatgtccaactcctcccgggctgcagtgcac
agtgatgggaccctggacatccttatcagcactgtgaaggactcaggctccttcatctgt
gttgcctccaacccggccggggaggcccaacaaactgttgacctggtgatcgctaaactc
ccacacatcaccaacagtactgtggagaaggaacaggacccaggttcttctgatatcgcc
acggtaacgaggacaggtggtggtggggaaggcggaggagtggtgccactgggaaacaca
aagacgagccaggagaagaaggtagtgatcgctgaggccacgtctacctcggccctggtc
aggttcagcttccagagaagtataccgggcatccgaatgttccagatccaatacaacgga
acctacgatgactctctggtttacagaatgatccctccgagcagtaagagtatcctggtg
aacaacctggctgccggtacacagtacgacctgtgtgtgctggccatctacgacgacctg
gtgacctccctgaccgccacgcgggtggtggggtgcatccgcttcaccaccgatccccag
tacctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatcatc
ggagggatcatcgtggcgtccgtcttagccttcatcatcttcctcatagtgaggtaccga
gtctgtaaccaaggtgatgaggataaggctttggaaatgggtgagatccagtctctgagc
agtgatggtcagctccagggctgcggcgtccccaagtccatgtccaagtctctgtccaag
cagattctctgtctggagaaaccagagaaggtggataaggagtatctgagggtgggcctt
cctccccctgagctgttcaagcagcagcgacccccagtcctgaccaccaccacatccacc
aagctctccattcccgactgccagacagatgtggagttagagaacacaaaccggaataac
tcagcggaagctaaaatggttgtttctgccgtttccacaaaatggacgaaggtcgctaga
gggccaagcccccctggagggtcctcccgccattacatgacagtgccagcagggggcgtg
agggtgaaccggcggcactctctgaacatggactcgtacaaggagtgctgctacttcagc
ctggtacagcagcagcagccaaagcctggtgggggtgtgcgctccaaacgcagtctgtcc
atgagtggagaactgccccagttggaaagtgcaatggcaaacatacgcagaagcagagac
aagctgtatggatccgagtggcttctcgaaagcactctatga
DBGET
integrated database retrieval system
