Salmo trutta (river trout): 115171203
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Entry
115171203 CDS
T08542
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115171203
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115171203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115171203
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115171203
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115171203
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
115171203
NCBI-ProteinID:
XP_029583655
Ensembl:
ENSSTUG00000012204
UniProt:
A0A673Y0X8
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All DBs
Position
32:15690753..15697734
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AA seq
551 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDAPVEEGGKPKVLYGV
EFTFDADARVAITLYCQAFEEFTNGMAMYNPKGPALVSETVHYKRGVSQHFSLPSFKIDF
TDWKEEDLNFDLDRGVFPVVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSEDENSDNSNECVVCLSDLRDTIILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGPLSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLHSVSPSIPPAPLYDDINFSGSLVGEGRPLGSPEHSGDGGLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTEATAAEDVPESISPDDEDR
LHSGGEREILQDYSSEHSSLTKTESDPPGDLSLRGSSESTESLKSQSTNCSSQPLLCPPS
SLHMEDEQLDP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgattcttagccggagaatcgctggcgttgaggatattgatatccaggcgaat
tcagcatacagatttccaccgaaatcggggaattactttgccagccattttttcatggga
ggggagaaatttgacactccccatccagagggttacctatttggagaaaacatggatctg
aacttccttggaaataggcctgtacaatttccgtacgtgacccctgcaccccatgagcct
gtgaagaccctgagaagtctggtcaatatcagaaaggactccctgcgcttggtcaggtac
aaagatgacactgatgctccagtagaggaaggaggcaagccaaaggttctgtatggtgtg
gagttcacatttgacgctgatgctcgtgtggctatcaccctgtattgccaagcttttgag
gaattcaccaatgggatggcaatgtacaacccaaagggcccagccctggtttctgagact
gtacactataagaggggtgtgagccaacatttctccctgccttctttcaaaatcgatttc
accgactggaaggaggaggatctgaactttgacctggaccggggtgttttccccgtggtg
atccaagctgtggtggatgaaggggatgattgcttgggacatgcacatgtgctgctggca
gcctttgagagacatgtggatggcagtttctccgtcaagcctctgaagcagaagcaaatt
gtggatcgtgtgagctacctgctgcaggagatctatggaattgaaaacaaaaacaaccaa
gagaccaagccgtcggaggatgagaacagtgacaacagcaatgagtgtgttgtttgtctg
tcagacctccgagacaccatcatcctgccctgcagacacctgtgtctctgcaactcctgt
gctgacaccctgcgttaccaggccaacaactgtcctatctgcagactgcccttccgagcc
ttgctgcagatcagagctgtgagaaagaagcctgggccgctgtcccctgtctctttcagc
cctgtactggctcagaccatggaccatgatgagcactcgagctcagactcggttccccca
ggctttgagcccatctctctgctggaggccctgaacggcctgcactcggtgtccccctcc
attccccccgcacccctctacgatgatattaacttctctgggagcctggtaggggagggc
cggccgctgggctccccagaacactccggggacgggggcctgcagaagggcaaagtcagc
aagtcacctgacagcaccctgaggtcgccctcatcacccatccaggaggaggatgaggag
aagctgtctgagatgtcggacgcccagcctcacaccctgctctccagcagccctgctccc
accgaggccactgcagccgaggatgtaccggagtccatctccccagatgatgaggacagg
ctgcactctggaggagagagagagatccttcaggactacagcagtgaacacagcagcctg
accaaaacagagagtgacccgccaggggacctgtctctgcgggggtcatcagagtcaaca
gagagcctgaagagtcagagtaccaactgctccagccagcccctcctctgtccccccagc
agccttcacatggaggatgagcaacttgacccctaa
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