Salmo trutta (river trout): 115171288
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Entry
115171288 CDS
T08542
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115171288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115171288
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115171288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
115171288
NCBI-ProteinID:
XP_029583829
Ensembl:
ENSSTUG00000030928
LinkDB
All DBs
Position
32:complement(17813754..17819144)
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AA seq
574 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNALGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRRVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDDLREVMDGLNMGDLLGSLSDD
EGEPEEDDDEEDDDDDDEEDDDEEDDYEEEDDVEEEEDSGVNQVSSPPSVPRPPDAASFL
CFPSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDEDVKSAVLDSIDAI
LRKAFASPSFQGYNFVSSLLVMLGLLKSEDKVKPVRVVPGHLQALEYVVRQDYFPQDHIA
VLEAFMSRHVQALESCSSARNILKSTLEQVRPEN
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggcaaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aacgccctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccacccaggggtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagagtccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcagtcactgaggggcttcccatcctcaaggagctgaatctg
tcatttggggagatcacaggagaagctgcactgctagtggcacaatcagtcgagggcaaa
gccacactggaaaaactggacttaaatggtaactgcctgggggaggagggctgtgatgat
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagtgacgat
gaaggggagccagaggaggatgacgatgaggaggatgatgacgacgacgatgaggaggat
gacgatgaggaggatgactatgaggaggaagatgatgtggaggaagaagaggacagcggt
gtgaatcaggtttcctcccctccgtcagtgccccgacccccagatgccgcctccttcctc
tgcttcccctcccctgataagctgctcaaactgggcaccaagagggccctgctctttgaa
cagcaggtagatgtggctgatgctggtaagacagcggaggctttcctgaaaatctcctct
gtgtacaatgaggaagatgaagacgttaagagtgctgtcctagacagtattgatgcaatt
ctcaggaaagccttcgcaagcccctccttccaaggttacaactttgtatcatcgctgtta
gtaatgctgggactcctcaagagtgaggacaaggtgaagccggtacgtgtggtgcctggt
catttgcaggccctggagtacgttgtgcgccaggactacttcccccaggaccacatcgcc
gtactggaggccttcatgtccagacacgtccaggccctggagtcgtgcagcagcgccagg
aacatcctcaagtccacgctggagcaggtcaggcctgagaactga
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