KEGG T08542: 115171293

Salmo trutta (river trout): 115171293

Entry

115171293         CDS       T08542

Name

(RefSeq) DNA-directed RNA polymerase III subunit RPC8-like isoform X1

K03022

DNA-directed RNA polymerase III subunit RPC8

Organism

stru Salmo trutta (river trout)

Pathway

stru03020

RNA polymerase

stru04623

Cytosolic DNA-sensing pathway

Brite

KEGG Orthology (KO) [BR:stru00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115171293
09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    115171293
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115171293
Transcription machinery [BR:stru03021]
Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     115171293

SSDB

Motif

Pfam:

RNA_pol_Rbc25 SHS2_Rpb7-N DUF2278

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

32:17896215..17905142

AA seq 208 aa
MFVAVEMVDTVRIPPWNFQRQFNEAIAEELNKKLANKVVYQVGLCICLYDITKLEDSYIF
PGDGASHTKVHFRYVVFHPFLDEILVGKIKYCSQEGVHVSLGFFDDIVIPPESLQQPAKF
DEAEQVWVWEYETDEGAHDLYMDQGEDIRFRVTDEVFLDTSPTGPSAAATNTPAAPGAEE
GGQKKEAPYTLLGTISEPGLGLLSWWNS

NT seq 627 nt +upstreamnt +downstreamnt
atgttcgtggcagtggagatggttgacactgtcagaatccccccatggaatttccagcgg
cagttcaatgaagccatagccgaagaactcaacaagaaattagccaataaggtggtttac
caggttggcctctgtatctgtttgtatgacatcacaaaactggaggattcctacatattc
cctggcgatggagcttcccacaccaaagtccacttcaggtatgttgtgttccaccctttc
ttggatgagattcttgttggaaagatcaaatactgcagtcaagaaggagtacatgtcagc
ctaggattctttgatgacatcgtcattcccccagagtccctacagcagcctgcaaaattc
gacgaagcagagcaggtgtgggtgtgggagtatgagacggacgaaggggcccatgacctc
tacatggaccaaggtgaggacatccgcttccgggtcacagatgaagtcttcttggacacg
tcgcccacaggcccttctgctgcagcaaccaacacccctgcagctccaggagcagaggag
ggtggccagaagaaagaggccccttacacactgctaggtaccattagcgagccaggcttg
ggcctcctgtcctggtggaacagctag

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