Salmo trutta (river trout): 115171336
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Entry
115171336 CDS
T08542
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115171336
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115171336
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
115171336
NCBI-ProteinID:
XP_029583910
LinkDB
All DBs
Position
32:18529482..18558402
Genome browser
AA seq
2555 aa
AA seq
DB search
MQNFPNSPAPPALPPGFTSRGGGGSSYPPQSTDPQISPRMTDDYTGMQQQTPPNPHSRHL
LHRGHHHPSQAGHMLAYDARNRAGESSHGNIHSGSSSNPYQKETMDYYFAMGGKDRHRRG
GMAYGAGFGYSNMDGHIPQQYRQTGTSSGLSSGMMSPYPLDYGSTAVSGGSSSGSSGAGA
FSPSHQYKMGQNPAMQPASGPQMQHRQHGQNYPAHQVLQHGQQHRTYPISGHRMPPQFSH
YSPQGSASTGSSGMYSSPPQRYHDGASSGGGFEPKVNNSPNMNSNSNSISSSATTNNVGS
LENVAKSYHSSSYPSYSPQTHPLHKQATLQHRNSQHNLGIGYDNSLKMQHHAPPPGSVYS
KHHQSTNPGMPQQPCQEMAKSPMHSQPQQGQINQNFSPISNPSPAASAVQSPSCSSSPSP
LMGVSEGHGNPSCPPHVPSHPPPPNPRSCRGRLLQTMPQLSPTPNSNSSISSCGSSGSNK
ATGLNTSAGGGHLVSNRSRIAAGTGKGSHEEGSSSSVYSSSPLDKLMQDPGLNSLNALTS
QVANLPNTVQHMLLTDTLMSHRRGKDGQSQMLQALQAIPSTQPRSRSVSAASSSGIGGGE
GASSEAGGDEDSFLVSERVSSRAKEERDEPISVGEKSRMRQMSGASSGSEPTGYYPPPSQ
SQMSMGSSKNQSHTGKRDQGSQGKMMFTESSTKQSLNPSDVSERKTTETRTPSSSSPSSA
PQSAEPGPCVHSHPPVSSTPSCPIPPPAPQFHPNCVSEPGATDVNTKNGLRKTREIKYEG
IKDESGGMIEKIEKGPHGEQTREGHMRPDGQDKENKLDRSSLRNKKADEKDGKRCKTRDL
DNSSQDQNIEEQPNAGGVGVIVSTRCEVNNPEKATHAQDNCIEVKHSDSFFRESSRHNGE
EGMDLSVYSSHHEVPQKSNFGRSVPQNHPPSGPQKYGYQESPHGAAMGLKNRGRPIPGSV
TGSNSRYQGFHQPKPNYGPEHTKDVAGTTVEGSVRRREGSGARGHDDNSQLQHPFPSLLQ
EVLQGYHLDRRYGRSEQALTAHLQAQNMTRQQYQTRHPYGMAESMRTQTGVGEVTSHPSR
ITSPGKPLQLNQRQGPGSDFVPESPQSSLRSEGVDTKGSHSASSEKNKMATPQRHPTHMP
QSTEFLSGPPPKHINLADYSLPHRKPPSGLPSSSSAVQELLLQETEPLAGSVGTIGQIES
QMLTSSLLPPSKERRSVICDVCPNRHSTPERDGEREREREKSPIGASVIQLPSTNDLGNS
KEMGDKKEVGVKVASKDTAEAVHHSGLTTKETDVEHHNKALHPSVVMNSEPLRRGKIDLT
TTMPSRHLQQTSHYPSTTNPLSPPSRRQSYPHGVDLSTGHASGFPGSRFGDTREGNMMPR
NPHFHNPYHSPQVQLQNPQAANKLQMYTHLHAHDLDDRLDWAATINRPTKDMMQSSTSPG
RHKLSHSEQRQRMQSPTDILHNRQPFAKQQVPHQNTYYDMKMWESTHSGRASVGMLEGDP
YQRSQQPPPAAPLGSVAPQLVPTASPVSNILESPVSQVVTEDIFKSLHPTPTPNSMKTVG
HSIGGNVNSVMPQSHRPNKTGGSGDTNPLMLRRRVRSFISPIPAKRQHQDVSQQRSAPSS
YHSPLAYSESSLQNDDDSSSSDITTLGSPNTPCPTPGQSTYSQSSSPVQGKKSLPQRKGR
GLKLEAIVQKITPNVKKSTNSGHADVDSNDFAGFSHTEMSQFTDTQDEEECLPYLDESLS
LSDIMPYRGVDETGLLPPTAYPCDPHQTSQVLKRGTTGTVTRPLQPDFDFGLGTAASSTG
DRDKEIPADFTLLGPLPPPPPLPCPVQGSPPPSSSALSDIQHFTNTYQQLETRRGEQSAA
NLLRQKLEETGIGFEDYSRSDYYGTTPPHHSQAQGHLLRQPHQTSPRSSLAMTGSPQDSK
QSDNSVPKGYFPSGKKKGRPVGSVNKQKRAQATQAQAQNVSPSALSGPPIQSPATVSPQV
APSPSTTASASSVTPPTDQKMTPPEIPPVLTQAVKVDAESEDTQPETEVKSVCQKQGGVK
DESEVVGSRGRQRRRRRGVAAAAAKDDLEAATRAGEYFDNSRVLPDNSKCAFAPYIHVER
KVAEIGAVCTIVNGEEEKMKGERGAVGGKASSSGIEALLTSALLSQLPRRDGEIERVKEK
RELEDVDSALQAGKVLPSSEYLLPGPVITESIHSGRLLCCLCQKWANYKNLGDLYGPYYP
PEYATRLPKNQPQIRQSLVTTGMSRNVQNLDTISNVLTTQGRELQDVPTIKSSTYSDCMF
SQETNTTSPATAVGTASPAGGGEMLYLASKLAKTTTNKTTVLKWDMPPELKPVTELRKQP
ELQNDPTYSQQNQPCQQQQTEDTQQRPQHRKLTSHPRFKRRQKSSEDSPRMVPSNSKASL
PFQPPPPTLDSLGPLAQLAQLPQMPIDPEELWVHEACMVWTSGVYLVNGRLYGLQEALDG
ARDTVCSYCEMVGSTLGCYSKGCTLRYHYPCAMDADCSLNEDNFSLRCPKHKVKRESFPR
AASQLNLCTLSSLKEAERDTEEEETQEYRIGMLGR
NT seq
7668 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttccccaacagtccagcacctccagctcttcctcctggatttactagtagg
ggtggaggtggctcctcttacccaccacagtcaacagatccccagatatccccaaggatg
acagacgactacactgggatgcaacagcaaacacccccaaaccctcacagtcgacaccta
ctccatcgagggcaccaccaccctagtcaggctggccatatgcttgcttatgatgcaaga
aacagagctggggaatcatcacacggtaatattcacagtggcagtagtagcaacccttac
caaaaggaaacaatggattattattttgcaatgggtggaaaggacagacatagaagagga
ggtatggcatatggggcaggttttgggtactcaaatatggatggacatatacctcagcaa
tacagacaaactggaactagctccggattgtcctccgggatgatgtctccctatcctttg
gactatggttcgacggccgtctccggtggtagtagcagtggcagcagtggtgctggagca
ttttccccctcccatcagtacaaaatgggtcagaaccctgctatgcagccagcatcaggg
cctcagatgcagcaccgccaacatggacagaattaccctgcccatcaagttctgcaacat
ggacagcagcataggacttatcccatctctggacacagaatgcctccacagttctcacac
tactccccacagggtagtgcatccacagggtcatcaggaatgtacagctccccaccacag
agatatcatgatggggccagcagtggtggtggatttgaacctaaagtcaacaactctcct
aatatgaactctaattcaaactcaatttcaagttcagctacaacaaacaatgttggatca
ctggagaatgttgcaaagagttaccactcttcaagttatccctcatactccccacaaact
catccactccacaaacaagccaccctccagcaccgcaattctcagcacaatttaggaata
ggttatgacaactctctcaaaatgcagcatcatgcccctccaccaggttctgtatactct
aaacatcaccaatccaccaatcccggaatgcctcaacaaccgtgtcaagaaatggccaaa
tcgccaatgcactctcaaccccaacagggccagattaaccaaaacttcagccctatatct
aacccctctccagctgcctctgcagtgcagtctcccagttgtagctcctcaccttccccg
ttgatgggtgtctcagaaggtcatggaaacccttcatgtcccccacatgttccatcacat
cctcctcccccaaatcctcgtagttgccgtggtcggttattgcagactatgcctcagttg
agtccaacacccaactccaacagcagcatcagtagttgtggcagcagtggcagtaacaaa
gctactggtctgaatacaagcgctggaggtggtcacttagtctcaaaccgaagcagaatt
gctgcaggtacaggaaaaggatcacatgaagaagggtcatcctcgtctgtctattcatct
tctcctcttgacaaactcatgcaagatcctggcttgaacagtctaaatgcgttgacatca
caggtagcgaatttacccaatacagtgcaacatatgcttctcactgacacattaatgtca
catagaagggggaaagatggacaaagtcaaatgctgcaggcattacaagccattccctct
actcaaccaaggagtcgaagtgtcagtgctgcctcaagcagtgggataggtggtggtgaa
ggtgctagctctgaggctggaggtgatgaagattcctttctggtgtccgaaagagtatca
tcaagggccaaagaggaacgagatgagccgatttctgtgggggaaaaatctagaatgcgg
cagatgagtggcgcaagcagtggatcagaaccaactggctactatcctcctccatctcag
agtcaaatgtccatgggttcaagtaaaaatcaatcccatactggaaagagggatcagggt
tcacaagggaagatgatgttcacggaatcttctacaaaacaatctctgaatccatcagat
gtttctgaaagaaagacaactgaaacccggacaccttcatcgtcatctccctcctctgct
cctcaatctgctgagcctggtccatgcgtacattctcaccctcccgtttcctctactccc
tcatgccccattccccctcctgctcctcagttccacccaaactgtgtttctgagcctggt
gccactgatgttaatactaaaaatgggcttaggaaaacaagggaaattaaatatgaagga
attaaagatgaaagtggagggatgattgaaaaaattgaaaaaggcccccatggagagcag
acccgagagggacacatgcgacccgatgggcaggacaaagaaaataaattggatcgatct
tccttgcgtaacaaaaaggccgatgagaaggacggaaaacgatgtaagacacgagatttg
gacaactccagtcaagatcaaaatattgaggaacagccaaatgctggtggagtgggtgtt
attgtgtcaactcgttgtgaggtaaataatccagaaaaagctacacatgcacaagacaac
tgcatagaggtgaaacattcagacagcttctttagagagtctagtcgtcataatggggag
gaaggaatggatttgagtgtatattcctctcatcatgaagttccccagaaatctaacttt
gggcgttctgtccctcaaaatcatcccccctcaggtcctcaaaaatatggttaccaagag
tcaccacatggtgctgccatgggtttgaagaacagggggagacctattccagggagtgta
acgggatcaaattcaaggtatcaaggcttccatcagccaaagcccaattatggccctgaa
cacaccaaggatgtcgcaggtactacagttgagggatcagtgaggagaagagaaggatca
ggtgcaagaggacatgatgataattctcaactccagcatccatttccaagcctcttgcag
gaggttctacagggttatcacttagaccgacgctatgggcgatctgaacaggcactaact
gcccatctccaggctcaaaatatgactcggcaacagtaccaaaccaggcatccttatggc
atggctgaaagtatgagaacccaaactggagttggagaggtcacttcccacccctcccga
ataaccagccctggaaagcctcttcaactaaatcagcgccaggggcctggatctgatttt
gtaccagaatcacctcaatcctccttgaggtctgaaggagtagatactaagggatctcac
agtgcttcttcagagaaaaataaaatggcaacaccgcagcgtcaccccacccatatgcca
cagtctacagagtttttgtctggacctccaccaaaacacatcaatttagctgactactcg
ttacctcacaggaaacccccttcaggtctgcccagctcatcgtcagctgtacaggaactc
ctattgcaggaaacagagccgctagcaggcagtgttggaaccataggtcaaattgagtct
caaatgttgacgtcctcccttttacctccatctaaagagcgccgctctgttatatgtgat
gtttgtcccaatcgccacagtacaccagaaagggatggggaacgtgaaagagagcgggaa
aaaagtccaattggtgcctctgtgatccaactgccatcaacaaatgatctagggaacagt
aaggagatgggagataaaaaagaggttggagtgaaggtagcatcaaaggacactgcagag
gctgtccatcatagtggtcttacaaccaaggaaaccgatgttgagcatcataacaaggct
ttacacccatctgtggttatgaattcagagcctcttagaagaggtaagattgatttgacc
accaccatgccctctcgacatctgcagcaaacctctcactatccctctaccactaaccct
ctgtctccaccatcaagacgtcagtcatacccacatggtgtagatttatctacagggcat
gccagtggctttcctggttccaggtttggtgatacaagagagggcaatatgatgccacgt
aacccccattttcacaatccctaccactcaccccaagttcaattacaaaacccacaagcc
gcaaacaaattacaaatgtatactcacctccatgctcatgacttggatgacagacttgat
tgggcagctaccattaatagacccaccaaggatatgatgcagtccagtacttctccaggt
agacataaactcagtcattcagagcagagacaaaggatgcaatctccaactgacattttg
cacaatcgccaaccattcgctaaacagcaagttcctcatcagaacacttactatgacatg
aaaatgtgggagtcaacacactctggtagagcgagtgtagggatgttggagggggaccct
taccagagaagtcaacagccacctcctgctgctcctcttgggtctgttgccccccaattg
gttccaacagcttcaccagtctccaacattcttgaatcacctgtctcccaagtggttaca
gaggacatctttaaatcactccatccaacacctacacctaattccatgaaaacagttggt
cacagtattggtggcaatgtcaattccgtgatgccacagagccatcgaccaaataaaact
gggggttctggggacactaatccattaatgttgaggaggagagttcgatctttcatttcc
cctatccctgccaagaggcagcatcaggatgtatcacagcaaaggagtgcccctagttca
tatcactcacctttggcctactctgaatccagcctccaaaatgacgatgactcatccagt
tcagatataactacacttggttcacctaatactccttgtcccacacctggacaaagcact
tattcacaatcctcctcacctgttcagggtaaaaagagtctgcctcaaagaaaagggaga
ggtttgaaactggaggctattgttcagaaaattacaccaaatgtgaagaaatctactaac
agcggccatgccgatgttgactcaaatgattttgctggattttctcacactgaaatgtca
cagtttactgacacacaggacgaagaggaatgtttaccttatctagatgaaagtctctca
ttaagtgacattatgccctacagaggggttgatgagactggactgttacctcccaccgca
tacccttgtgatcctcaccagacatcacaagttcttaaacgtggcaccacaggaactgtt
acaagacctttgcagccagactttgactttgggttagggactgcagcatctagtactggt
gatagagataaagagatacctgctgacttcaccttgttagggcccttacccccacctcca
ccactaccttgtccagtacagggctcccccccaccttcttcatctgccttgtctgatatt
caacatttcactaatacttaccagcaacttgagactcgaagaggtgaacaatctgctgct
aaccttctgagacaaaaacttgaagaaactgggattggatttgaggattacagtaggagt
gactattatggaaccaccccaccacaccacagtcaggctcaagggcacttactaagacag
ccacatcaaacttctccaaggtcatctttggcaatgacagggtcaccacaagattccaaa
caatcagacaattctgtacccaaaggctatttcccatcaggcaagaagaagggaaggcct
gttggaagtgtgaataagcaaaaacgtgctcaagccacccaggcccaggcacagaatgtg
agcccaagtgctctgtctggcccacccattcaatctcctgcaactgttagcccacaggta
gccccaagccctagcactacagcctctgcctcatcagtcactcctccgactgatcagaaa
atgactcctcctgagattccaccagtcttgacccaagcagtaaaagtggatgctgaaagt
gaggacactcagccagagacggaggtgaaatcagtctgccagaaacaagggggggtgaaa
gacgagagtgaggtggtgggatcaagaggcaggcagaggaggagaagaagaggagtagca
gcagcggcggccaaagatgacctggaggcggctacaagagcaggggaatattttgataac
agcagagttttacctgataatagcaagtgtgcctttgctccatacatacatgtggagagg
aaagtagctgagataggagccgtgtgcacaattgtgaatggtgaagaggaaaagatgaag
ggagagcgtggagcagttggagggaaagcaagcagtagtggtattgaagctcttttgacc
tcagctcttttgtctcaactgcctaggagagacggagaaattgagagggtcaaagagaag
agggaactggaggatgtagactctgccctccaggcaggaaaggttctaccttcatctgag
taccttctaccaggccctgtgattactgaatccattcattctggccgtcttctctgctgc
ctgtgccagaaatgggccaattacaaaaaccttggggatctctatggaccttactaccct
cctgaatatgctacaaggcttcccaagaatcagccccagattcgacagagtcttgtaact
actgggatgagtagaaatgtgcaaaatctagacaccatttcaaatgtgttgaccacccag
ggccgtgaactacaagatgtgccaactatcaagtcctcaacttatagtgattgcatgttc
agtcaagagacaaatacaacttcccctgccactgctgttggcactgcctctccagcaggt
ggaggggagatgctttatctggccagcaaacttgctaaaaccacgaccaacaagacaaca
gttcttaagtgggacatgcctccagagttaaaaccagttactgagctaaggaaacaaccc
gaacttcagaatgatcccacttacagtcagcaaaaccaaccatgccagcaacagcagaca
gaagacactcaacaaaggccacaacacagaaagctgacctcgcacccgagatttaaaagg
agacagaaatccagtgaggattccccaagaatggtaccatccaacagcaaagcctcattg
ccattccagcctcctcccccaaccttggactcccttgggcctttggcacagctggcccaa
cttcctcagatgcctatagacccagaggagctgtgggtgcatgaggcatgcatggtctgg
accagtggggtttacctggtcaatggaagactgtatggcctacaggaggcactagatggt
gccagagacacagtctgctcatattgtgaaatggttggctcaacccttggctgttacagc
aaaggctgcacactgagatatcactacccatgtgccatggatgcagactgctctctgaat
gaagataacttttcactacgatgtccgaagcacaaggtaaaaagggagagtttccccaga
gcagccagccagctaaatctgtgtaccttgagcagtctgaaagaggctgagagagacact
gaggaggaagagacgcaggagtataggatcggtatgcttggacgatga
DBGET
integrated database retrieval system
