Salmo trutta (river trout): 115171354
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Entry
115171354 CDS
T08542
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115171354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115171354
03036 Chromosome and associated proteins [BR:
stru03036
]
115171354
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115171354
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115171354
Chromatin remodeling factors
BAF complex
115171354
PBAF complex
115171354
GBAF(ncBAF) complex
115171354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
115171354
NCBI-ProteinID:
XP_029583947
Ensembl:
ENSSTUG00000003900
UniProt:
A0A673W7Y4
LinkDB
All DBs
Position
32:20100266..20134674
Genome browser
AA seq
1638 aa
AA seq
DB search
MSTPDPPMGGTPRLGPSPGLGPSPGPGTSPGAMGPSSSPGSAHSMMGPSPGPPASGHSHT
QQGPSGYPQENMHQMHKPMEGMHEKGMSDDPRYGQMKSMGMRAGGGHIGMGPPPSPMDQH
SQGYPSPLGVSEHSPSPVPANGPPPSPMMHSCPGVPMEGGDLRAMGQQSLGGVLSGGSVP
GGVGPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQQPGMPN
MPPSSGPGAGPGQPPANYNRPLGMVGPNMPPPGPSGVPPGMQGQPTNGPPKQWPEGPMVN
AAAPSSAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPPQPPPMVLHQKQNRI
TPIQKPRGLDPVEILQEREYRLQARITHRIQELEHLPGSLAGDLRTKANIELKALRLLNF
QRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKH
QEYLNSILQHAKDFKEYHRSITAKLQKATKAVATYHANTEREQKKENERIEKERMRRLMA
EDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTDLVRAHKADQALKDKKKKKKKKKKKKP
DSGEGQPPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGLDAPRAGQLDTWLEMNPGY
EVAPRSDSEDSGSEEEEEEEEEPQPSQAPTEEKKKIPNPDTDDVSEVDARYIIEGAKQDV
DDEYNSAEAAFARGLQSYYAVAHAVTETVDKQSTLLVNGQLKHYQIKGLEWLVSLYNNNL
NGILADEMGLGKTIQTIGLITYLMEHKRINGPFLIIVPLSTLSNWVYEFDKWAPTVVKVS
YKGSPQARRAFLPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKL
TVVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGEK
VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRVLYRHMQA
KGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFTGGVVSGP
DLYRAAGKFELLDRILPKLRVTDHKVLLFCQMTSTMTIMEDYFGWRNFKYLRLDGTTKAE
DRGMLLKTFNDPASQYFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRI
GQRNEVRVLRLCTVQSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEH
EEQDEVGAPGGWRAGGALEEDEVPDDETVNQMIARSEEEFDQFMRMDLDRRREDARNPKR
KPRLMEDDELPTWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIE
DGNLEDLEEEVRHKKTTRKRKRDRDDMPGPATPSSSGGGGGRSRDEEVKKAKKRGRPPAE
KLSPNPPSLTKKMKKVVDTVIKYKDGSNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRK
IKERIRSHKYRSLNDLEKDVMLLCSNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEKE
EESEGEDSEEEEEEVDEGSESESRSVKVKIKLGRKEKEGRGKGQRRRGRGSRAKPVVSDD
DSEEEQEEAGSASGSEED
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccggacccccccatgggagggacgcctcggctgggcccgtctccagggctg
ggcccgtctccagggccgggcacgtctccaggagccatgggccccagctcttccccaggc
tctgctcatagcatgatgggacccagcccaggtccaccagcctctggacactcccacaca
caacaggggccctcaggatatcctcaggagaatatgcatcagatgcacaaacctatggaa
ggcatgcatgagaagggcatgtctgatgaccctcgctatggacagatgaagagcatgggc
atgagagcaggtggaggccacattggaatgggaccccctcctagccccatggaccaacat
tcccaaggctacccctctccactgggggtttctgagcactctcccagccctgtgccagcc
aacggccctccccccagccccatgatgcactcttgcccaggtgtccccatggagggtggt
gacctccgggccatgggccagcagagcctcggtggtgtcctgagtggtggttctgtgcca
ggtggggttgggcctggtggacccacccccttcaaccaaaaccagctgcaccagctcagg
gcccagatcatggcctacaagatgctggctcgcagccagcccctgccagaccacctgcag
atggctgtgcagggcaagaggcccatgccagggatgcagcagcagccagggatgcccaac
atgcccccttcctctgggcctggggcggggcctggacagccaccagcaaactacaacaga
ccacttggaatggtgggcccaaacatgcctcctccaggaccctcaggtgttccccctggt
atgcagggccagcccaccaatggaccccctaaacaatggcccgaagggcctatggtgaat
gctgctgctccatccagtgccccccagaagctgattccccctcagcccactggcagaccc
tcccctgctcccccctccgtgccgcctgctgcctccccggtcatgcccccccagacccag
tcccctgggcagcccccccagcctccacccatggtgctgcaccagaaacagaaccgcatc
acgcccatccagaagccccgtggcctggacccagtggagatcctccaggagagagagtac
aggctgcaggctcgtatcacccaccgtatccaggagctggagcatctaccagggtctctg
gccggagacctgcgcaccaaagccaacattgagctcaaggccctgaggctgctaaatttc
cagagacagctgcgtcaggaggtagtggtgtgtatgcgtcgtgacacggccctggagacg
gccctcaacgctaaggcctacaagcgcagcaagcggcagtccctccgcgaggcccgcatc
acagagaaactggagaagcaacagaagattgaacaggagcgcaaacgacgccagaaacac
caggaataccttaacagcatcctgcagcatgctaaagacttcaaggagtaccaccgctcc
atcacagccaagctccagaaggccaccaaagctgtggccacgtaccacgccaacactgag
cgcgagcagaagaaggagaacgagcgcattgagaaggagagaatgaggaggctgatggct
gaagatgaggagggctaccgtaagctcattgaccagaagaaagacaagcgtctggcctac
ctgctgcagcagacagacgagtacgtggccaacctcaccgatctggtcagagcccacaag
gctgatcaggccttaaaggacaagaagaagaagaaaaagaagaagaagaagaagaagcca
gatagtggggagggccagcctcctgccctgggacccgacggagagcctctggatgagacc
agtcagatgagtgacctgcctgtgaaggtgatccatgtagacagtgggaagatcctgacg
gggctggacgcgccccgggctggccagctggacacctggctggagatgaaccctgggtat
gaagtggctcctcgttcagacagcgaggacagtggctcagaggaggaggaggaggaagag
gaggaaccccagccctcccaggctccaactgaggagaaaaagaaaatcccaaaccccgac
acagacgacgtgtccgaggtcgacgcccgctacatcatcgagggagccaagcaggatgtg
gatgatgagtataacagtgccgaggcggcgttcgcccgaggcctgcagtcttactacgct
gtggcccacgccgtcactgagacggtggacaaacagtccacactgctggtcaacgggcag
ctcaaacattaccagatcaagggcttggagtggctggtgtctctgtacaataacaacctg
aatgggatcctggctgatgagatgggtctgggcaagaccatccagaccatcggcctcatc
acctacctcatggagcacaagcgcatcaacggccccttcctcatcatcgtgcccctctca
actctgtccaactgggtgtatgagtttgataagtgggctccaactgtggtgaaagtctct
tacaaaggctccccacaagctcgccgggctttcctccccatcctgcgcagcggcaagttc
aacgtactgctcaccacctacgagtacatcatcaaagacaagcaagtgctggctaagctg
cgatggaagtacatgatagtggacgaaggccaccgtatgaaaaaccaccactgtaagctg
actgtggttctgaacactcactacctggccccgcggcgtctgctgctgaccggcaccccg
ctgcagaacaagctgccggagctctgggccctgctcaacttcctgctgccgaccatcttc
aagtcctgcacaaccttcgagcagtggttcaacgctcccttcgccatgaccggagagaag
gtggatctgaacgaggaagagaccatcctgattatccgtcgtttgcacaaagtgctccgc
cccttcctgctgcgcagactgaaaaaggaagtggagtcccagctgcctgagaaggtggag
tatgtgatcaagtgtgacatgtcggccctgcagagagtgctgtacagacacatgcaggct
aagggtgtgctgctcaccgacggctctgagaaagacaagaagggtaaaggaggcaccaag
accctgatgaacaccatcatgcagctgaggaagatctgtaaccatccctacatgttccag
cagatcgaggagtccttctctgagcatttgggattcactggaggcgtagtgtctggacct
gacctgtaccgcgccgctgggaagtttgagctgctagaccgtatcctgcccaagctgagg
gtcaccgaccacaaggtcctgctcttctgtcagatgacttccaccatgaccatcatggag
gactactttggctggcgcaactttaagtacctgcgtctggacggaaccactaaggctgag
gatcgtgggatgcttttgaagaccttcaatgaccccgcctctcagtactttgtgttcctg
ctcagcaccagggccggcgggctgggcctcaaccttcagtctgctgacaccgtggtcatc
tttgactcagactggaacccacatcaggacctgcaggcccaggacagagcccaccgtatc
gggcagcggaacgaggtgcgtgtgttgcgtctctgcaccgttcaaagtgtggaggagaag
atcctggcggcggccaagtacaagctgaatgtggaccagaaggtcatccaggccggcatg
ttcgaccagaagtcgtcgagtcacgagcgccgtgccttcctgcaggccatcctggagcat
gaggaacaggacgaggtcggggccccggggggctggcgcgctgggggggcgttggaggag
gacgaggtgcctgatgatgagaccgtcaatcagatgattgccaggagcgaggaggagttt
gaccagttcatgcgtatggacctggaccggcgccgtgaggacgcccgcaaccccaagaga
aagccccgtctgatggaggatgacgagctgcccacctggatcctaaaggatgatgccgag
gtggagaggctcacctgtgaggaggaggaggagaagatgtttggtcgcggctctcgccag
cgcaaggaggtggactacagcgactcactcacagagaagcagtggctcaaggccatagag
gacggtaatctggaggacctcgaggaggaggtgcgtcacaagaagacgacccggaagcgc
aagcgagaccgtgacgacatgcccggcccggccacgcccagctccagcggtggtggcggt
ggtcgcagccgtgacgaggaggtcaagaaggccaagaaacgcgggcgccctccggctgaa
aaactgtcccctaaccccccatccctcaccaagaagatgaagaaggtggtggacactgtc
atcaagtacaaggacggcagcaatgggcgccagctgagtgaagtcttcatccagctgccc
tcccgcaaggagctgcctgagtactacgagctcatccgcaagcctgtcgacttcaggaag
attaaggagaggatccgcagccataagtaccgcagcctgaatgacctggagaaggatgtg
atgctgctgtgtagtaacgctcagaccttcaacctggagggctctctgatctatgaggac
tccatcgtactgcagtcagtcttcaccagcgtcaggcagaagattgaaaaggagaaggag
gaggagagtgagggagaggacagtgaggaagaagaggaggaggtggacgaaggctctgag
tctgaatctcgttcggtgaaggtgaaaattaagctggggaggaaggagaaggagggcaga
gggaagggccagcgccggaggggccgtggctcccgggccaaacctgtagtgagcgacgac
gacagcgaggaggaacaggaggaggcgggttcggccagcggcagtgaggaggactga
DBGET
integrated database retrieval system
