Salmo trutta (river trout): 115171483
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Entry
115171483 CDS
T08542
Name
(RefSeq) elongator complex protein 1-like
KO
K11373
elongator complex protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stru03016
]
115171483
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
115171483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
115171483
NCBI-ProteinID:
XP_029584189
Ensembl:
ENSSTUG00000002917
LinkDB
All DBs
Position
3:complement(27522337..27538247)
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AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCSELQGPGTPQCFSVRTDTGTVLIASEYSVTELDPRAGQVMNEVSLTAE
RYLPEDGSGTVVGIQDLPDQESVCVATATGDVILYNLSTSQLECVGSVNSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPIIEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
KKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPQTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKALLWNSDST
VLAVWLEDMIREEGGQVNTYIQLWTVGNYHWYLKQSLYFGTDPQRAPADVSWDPERPLRL
HLVTRGWASLTYDWGWSTDRSHGVDGQDNANVAVIDGDKVLVSTFRQCVVPPPMCAYELQ
LPAPVNLVTFHRQPQRTNELAALTADGHILVYGQGTGDQSDPTARVGGFRSITHAPQLKT
TYRVLLDQEEPLALRLLLWLRGDVFLGVGGCAEGPSQCTLLILGPSEAQSPQSTLEIKSR
VELEGHVISMCHSSDTGTVALQLEDGRIRKFLWDSLKPSVVGWQDATGYSINFPDPCVQT
ALCTIEKEHLLGLTDRSHLFVDDTEVASNVSSFVVYDDFLLLTTHSHTCRCLRLSTLTVK
GLQVALAADGGQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQ
LRKCLDSQKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPYPSNATGQSAPGACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPGAANAVSAEEALKYLMFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEAVRALQAFVGSASW
RNALCVAEQIPLPPDQLALLARDLAEKLIELRRYTEAAILLEQYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQRAMFIRHKTRLAVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMSGSRAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKGLMLFQFDGQAGRLQQAYGEALQMMEV
ALPEVWQEGLQQSPAPITGPNSTANSIMASFQQPRPSSTQDSETPPPPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgaggttgctgaagagccttcgttgctcggagctgcagggcccgggcacg
ccgcaatgtttctctgttcggacagacaccggtacggtgctcatcgcttcggaatactcc
gtcaccgagttggacccacgagctggccaggtgatgaatgaggtgtcgttgacagctgag
cgctaccttccagaggatggcagtgggacagttgttggtatccaggacttaccagaccag
gagtctgtgtgtgttgctacagccactggtgatgtcatcctctacaacctcagcaccagt
cagttggagtgtgtgggcagtgtaaacagtggtctatcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gagcccatcatagaggttgggatccatcaggatgactttggagaggggaagtttattaca
gtgggctgggggaagaaggagacccagttccatggctcagagggcaagcacgctgcccag
aagaagaccatagaggtgcagccagccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagatggccagctcttcgctgtgagctctgtttgcccccagactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttgcagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcagccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaatggcctcctacacggggacttcacc
ctgccctttggaaaagaacaggtcaaggtgaaggcactgctgtggaacagcgactctact
gtgttggctgtgtggctagaggacatgatacgagaagaggggggccaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagagcctatattttggc
accgacccccagagggcgccagccgacgtgagctgggatcctgagaggcccctgaggctg
cacctggtgacccgaggctgggctagcctgacctacgactggggctggagcactgaccgc
agccacggggtggacgggcaggacaacgctaacgtggctgtgatcgatggagacaaggtc
ctagtgtcgacatttcgtcagtgtgtggtgcccccacccatgtgtgcctacgagctccag
ctgcccgcccccgtcaacctggtgaccttccaccgccagccccagaggaccaatgagctg
gcagcactcactgccgacggacacatcctggtttacggtcaaggtactggggaccagagt
gaccctactgccagagtgggaggattccgatctatcacacacgctcctcagttaaagact
acctacagggttttgttggatcaggaggagccccttgctctccgtctcctgctgtggctg
aggggggatgtgttcctgggggtggggggctgtgcagaggggccgtcccagtgcacgctg
cttatcctgggaccctcggaggcccagagcccccagtcaaccctggagatcaagtcacgt
gtggagcttgaaggtcacgttatcagcatgtgtcacagctccgatacgggcacagtggcc
ctgcagctggaggacggcaggatcaggaagttcctctgggactccctgaagcctagtgtg
gtgggctggcaggacgcgacaggctacagcatcaacttcccagatccctgtgtgcagacg
gccctctgtacgatagaaaaggagcatctgctggggcttacagaccgatctcacctgttt
gttgacgacacagaggtggcctccaacgtctcctccttcgtggtctacgatgacttcctg
ctactcaccacacactcacacacatgccgctgcctccgactcagcacactcactgtcaaa
gggctgcaggtggccttggctgcagacggaggtcagaatgatcagaatgacgagactctc
cgcagggtagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccaccatcgagcgctggtattggctcag
ctcagaaagtgtctggacagtcagaagttccgagaggcctttgagtgcatgaggaagctg
cggattaacctcaacctgatttacgaccacaaccccaaggtgtttttagagagcgtggag
accttcctgagacagctggactctatcaaccacatcaaccttttcctcacagagctcaaa
gaggaagataccactacgacaatgtacccatacccatcgaacgctacaggccagtcagcg
cctggggcttgtgggaagaaggttgacattgtttgtgatgcgctacgctgcaccatggaa
tctatggaccaacacaagtactgcctgtctatcttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccggtgca
gccaacgcggtgagtgcggaggaggctctgaagtacctgatgttcctagtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtagctgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaatatgctgaagactctagag
cccaactaccagcgctacaccatcgacaaacacctgaagagatacaggaaggccctgcac
cacctcagcaagtgtggtgaggagcacttcacagaggccctaaatctggtgaaggaccag
aggctgtatagtgaagccctggggctctatccaacagacagccctcagtacaaggccttg
agctgtgcctacgctgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgtggcgaggcagtccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatcccccttccacctgaccagctggcactgctg
gctagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcagtatgctaaggactgtgaggaggccatctcggctctgatcacaggtgcagtc
tgggaagaagcacttcgactggtgtacttgtacaacagacaagacatcattgaaacaaac
ctcaaaccagctctcttggaagcatgtagttctcagacctcctacctggaagctcagagg
gcgatgttcattcgtcacaaaacccgtctggccgtggtacgggagcttaaggaaaaggcc
aggctggagttactggatgaggatgtcccagactgtccagaggcagagctctactcagag
gccagtagtgtgatgtccggcagccgtgccggctccaagtactcacatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggctgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcacgccctggcagagatcatccactct
gtggacaagatgagagaggaggtgcacagcctgctgaagggcctgatgctgttccagttt
gacggacaggcggggaggctgcaacaggcctatggggaggctctccagatgatggaggtg
gcccttcctgaggtgtggcaggagggtcttcagcagagtccggctccgatcaccggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaccctcatcaacccaa
gattcagagactcccccacccccaaagatgagaaatggtgtcaagtggaagctgagtatt
ttgaagtag
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